Top 10 genes with highest correlation to Rv0056/rplI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2404c/lepA | (cc=0.6221) | info on Rv2404c/lepA |
| Rv0806c/cpsY | (cc=0.508) | info on Rv0806c/cpsY |
| Rv1253/deaD | (cc=0.4939) | info on Rv1253/deaD |
| Rv3041c/- | (cc=0.4891) | info on Rv3041c/- |
| Rv1829/- | (cc=0.4848) | info on Rv1829/- |
| Rv2966c/- | (cc=0.4848) | info on Rv2966c/- |
| Rv1019/- | (cc=0.4819) | info on Rv1019/- |
| Rv3544c/fadE28 | (cc=0.4784) | info on Rv3544c/fadE28 |
| Rv1822/pgsA2 | (cc=0.4752) | info on Rv1822/pgsA2 |
| Rv2733c/- | (cc=0.4733) | info on Rv2733c/- |
Correlation of Rv0056/rplI with Rv2404c/lepA
Normalized LFCs for Rv0056/rplI:
(description and provenance of datasets)
| Rv0056/rplI | Rv2404c/lepA | |
| Fe_supp_jason_reseq | 1.228 | 0.598 |
| low_pH_jason_reseq | -0.179 | -1.467 |
| NO_jason_reseq | -0.914 | 2.108 |
| B6_jason_reseq | -0.538 | 0.881 |
| MHCII_jason_reseq | 0.355 | -0.098 |
| Isoniazid02 | 2.183 | 5.905 |
| Rifampicin4 | 1.695 | 1.597 |
| Ethambutol3 | -0.85 | 1.79 |
| Meropenem3 | -1.842 | 0.264 |
| Vancomycin16 | 0.172 | 0.846 |
| Rv2680_day32 | 0.0 | -0.613 |
| H37Rv_KO_MarP | 1.369 | 1.555 |
| hypoxia_3wks | -1.798 | -3.274 |
| hypoxia_6wks | -1.148 | -3.802 |
| glycerol | 0.484 | 1.044 |
| cholesterol | -0.663 | -0.171 |
| AJ | -0.724 | -0.41 |
| Bibs02 | -0.062 | -1.46 |
| Bibs02c | -2.474 | -0.94 |
| BL6 | -0.949 | -1.237 |
| BL6a | -1.013 | 0.098 |
| BXD01 | -1.411 | -1.128 |
| BXD010 | -1.27 | 0.312 |
| BXD011 | 0.199 | 0.269 |
| BXD03 | 0.36 | 0.192 |
| BXD04 | -0.777 | -0.987 |
| BXD05 | -1.223 | 0.654 |
| BXD06 | 0.129 | 1.065 |
| BXD07 | -0.432 | 0.068 |
| BXD08 | -0.192 | 0.04 |
| BXD09 | -0.971 | -0.265 |
| CAST | -0.616 | -1.146 |
| CCcont | 1.082 | 0.0 |
| DS01 | -2.146 | -1.461 |
| DS02 | -2.571 | -2.658 |
| DS04 | -1.218 | -0.698 |
| DS0c | -1.97 | -1.422 |
| GP01 | -1.167 | -0.384 |
| GP02 | -0.984 | -0.867 |
| GP0c | -1.537 | -0.506 |
| NOD | -0.701 | -0.023 |
| NZO | -2.16 | -0.928 |
| PWK | -2.124 | -1.324 |
| H37Rv_KO_CtpC | -1.611 | -1.832 |
| H37Rv_KO_CtpD | -1.372 | -0.957 |
| H37Rv_KO_Rv1272 | 2.007 | -0.3 |
| H37Rv_KO_SugABC | 2.177 | -0.073 |
| H37Rv_KO_MbtN | 0.402 | 0.832 |
| Trans05 | -0.532 | -1.161 |
| macrophage_unactivated | 0.0 | 0.451 |
| IL1 | -0.546 | 0.249 |
| Rapamycin | 0.0 | 0.319 |
| Tcell | 0.186 | 0.068 |
| GMCSF | -1.7 | 0.816 |
| IFNab | -0.363 | -0.408 |
| IFNg | -0.673 | 0.224 |
| IFNg_GMCSF1 | -0.377 | 0.327 |
| Rv1432_day32 | 0.0 | 0.824 |
| Rv1565c_day32 | -0.7 | -2.443 |
| secA2_input | 2.677 | -0.542 |
| delta_Rv3594 | 2.509 | 3.552 |
| delta_Rv3717 | 2.718 | 4.823 |
| delta_Rv3811 | 1.782 | 2.528 |
| delta_Rv0954 | 2.638 | 3.693 |
| PonA1 | 0.352 | 0.0 |
| EccD1_KO | -0.135 | 0.056 |
| EspI_KO | -1.127 | 0.816 |
| PE35_KO | -1.152 | 0.298 |
| PPE68_KO | -0.934 | 0.915 |
| glycerol2 | 0.552 | -0.094 |
| lignocerate | -1.559 | -1.316 |
| oleate | -1.086 | -0.703 |
| phosphatidylcholine | -2.105 | -1.192 |
| acetate | -1.194 | -0.111 |
| glucAc | -0.695 | -0.084 |
| Rv0950ko | 0.072 | 0.651 |
| Rv1096ko | -1.583 | -0.19 |
| Rv3684ko | -0.246 | 1.002 |
| delta_otsA_trehalose | 1.163 | -0.866 |