Top 10 genes with highest correlation to Rv0053/rpsF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3228/- | (cc=0.5477) | info on Rv3228/- |
| Rv3060c/- | (cc=0.5362) | info on Rv3060c/- |
| Rv2907c/rimM | (cc=0.5361) | info on Rv2907c/rimM |
| Rv3276c/purK | (cc=0.5335) | info on Rv3276c/purK |
| Rv0806c/cpsY | (cc=0.526) | info on Rv0806c/cpsY |
| Rv3032/- | (cc=0.5098) | info on Rv3032/- |
| Rv2971/- | (cc=0.5071) | info on Rv2971/- |
| Rv0348/- | (cc=0.4916) | info on Rv0348/- |
| Rv2913c/- | (cc=0.4889) | info on Rv2913c/- |
| Rv2042c/- | (cc=0.4828) | info on Rv2042c/- |
Correlation of Rv0053/rpsF with Rv0806c/cpsY
Normalized LFCs for Rv0053/rpsF:
(description and provenance of datasets)
| Rv0053/rpsF | Rv0806c/cpsY | |
| Fe_supp_jason_reseq | 0.0 | -1.05 |
| low_pH_jason_reseq | 0.0 | -2.12 |
| NO_jason_reseq | 0.0 | -0.431 |
| B6_jason_reseq | 0.0 | -2.577 |
| MHCII_jason_reseq | 0.0 | -0.044 |
| Isoniazid02 | -1.379 | -1.614 |
| Rifampicin4 | -1.373 | -1.132 |
| Ethambutol3 | 3.122 | 1.245 |
| Meropenem3 | 1.198 | 0.477 |
| Vancomycin16 | 0.883 | -1.143 |
| Rv2680_day32 | 0.0 | -0.169 |
| H37Rv_KO_MarP | 0.793 | -0.474 |
| hypoxia_3wks | 0.0 | 0.239 |
| hypoxia_6wks | 0.0 | -1.729 |
| glycerol | 0.0 | 1.496 |
| cholesterol | 0.0 | -0.246 |
| AJ | 0.0 | -2.165 |
| Bibs02 | 0.0 | -0.658 |
| Bibs02c | 0.0 | 0.15 |
| BL6 | 0.0 | -2.417 |
| BL6a | 0.0 | -1.263 |
| BXD01 | 0.0 | -3.001 |
| BXD010 | 0.0 | -1.932 |
| BXD011 | 0.0 | -1.214 |
| BXD03 | 0.0 | -2.761 |
| BXD04 | 0.0 | -2.455 |
| BXD05 | 0.0 | -2.286 |
| BXD06 | 0.0 | -1.967 |
| BXD07 | 0.0 | -2.088 |
| BXD08 | 0.0 | -2.006 |
| BXD09 | 0.0 | -2.575 |
| CAST | 0.0 | -4.219 |
| CCcont | 0.0 | 0.037 |
| DS01 | 0.0 | -2.402 |
| DS02 | 0.0 | -3.605 |
| DS04 | 0.194 | -1.772 |
| DS0c | 0.0 | -1.255 |
| GP01 | 0.0 | -0.477 |
| GP02 | 0.0 | -1.699 |
| GP0c | 0.0 | -1.961 |
| NOD | 0.0 | -1.432 |
| NZO | 0.0 | -2.117 |
| PWK | 0.0 | -3.332 |
| H37Rv_KO_CtpC | 0.0 | -0.661 |
| H37Rv_KO_CtpD | 0.348 | -2.206 |
| H37Rv_KO_Rv1272 | 0.0 | -0.121 |
| H37Rv_KO_SugABC | 0.099 | 1.11 |
| H37Rv_KO_MbtN | 0.103 | 0.768 |
| Trans05 | 0.0 | -1.578 |
| macrophage_unactivated | 0.0 | 1.562 |
| IL1 | 0.0 | -0.32 |
| Rapamycin | 0.0 | 0.457 |
| Tcell | 0.0 | 1.45 |
| GMCSF | 0.0 | -0.187 |
| IFNab | 0.0 | -0.327 |
| IFNg | 0.0 | -0.39 |
| IFNg_GMCSF1 | 0.0 | -1.109 |
| Rv1432_day32 | 0.0 | 1.083 |
| Rv1565c_day32 | 0.0 | 0.087 |
| secA2_input | -0.122 | -0.105 |
| delta_Rv3594 | 1.53 | 3.879 |
| delta_Rv3717 | 1.513 | 4.198 |
| delta_Rv3811 | 0.87 | 2.208 |
| delta_Rv0954 | 1.852 | 3.34 |
| PonA1 | 0.0 | 0.0 |
| EccD1_KO | 0.414 | 1.822 |
| EspI_KO | 1.791 | 1.851 |
| PE35_KO | 1.832 | 0.601 |
| PPE68_KO | 1.113 | 1.913 |
| glycerol2 | 0.0 | -1.283 |
| lignocerate | 0.0 | -2.512 |
| oleate | 0.0 | -2.44 |
| phosphatidylcholine | 0.0 | -2.683 |
| acetate | 0.0 | 0.15 |
| glucAc | 0.0 | -0.272 |
| Rv0950ko | 0.0 | -0.051 |
| Rv1096ko | 0.0 | -0.576 |
| Rv3684ko | 1.444 | -0.468 |
| delta_otsA_trehalose | 0.254 | -0.149 |