Top 10 genes with highest correlation to Rv0039c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0631c/recC | (cc=0.5919) | info on Rv0631c/recC |
| Rv0377/- | (cc=0.5349) | info on Rv0377/- |
| Rv3480c/- | (cc=0.4585) | info on Rv3480c/- |
| Rv0797/- | (cc=0.4582) | info on Rv0797/- |
| Rv1681/moeX | (cc=0.4505) | info on Rv1681/moeX |
| Rv0470A/- | (cc=0.4348) | info on Rv0470A/- |
| Rv0447c/ufaA1 | (cc=0.4282) | info on Rv0447c/ufaA1 |
| Rv0400c/fadE7 | (cc=0.4256) | info on Rv0400c/fadE7 |
| Rv0847/lpqS | (cc=0.4244) | info on Rv0847/lpqS |
| Rv3655c/- | (cc=0.423) | info on Rv3655c/- |
Correlation of Rv0039c/- with Rv3480c/-
Normalized LFCs for Rv0039c/-:
(description and provenance of datasets)
| Rv0039c/- | Rv3480c/- | |
| Fe_supp_jason_reseq | -1.939 | -0.57 |
| low_pH_jason_reseq | 0.517 | 0.557 |
| NO_jason_reseq | -0.42 | -0.11 |
| B6_jason_reseq | 0.009 | 0.03 |
| MHCII_jason_reseq | -0.134 | 0.957 |
| Isoniazid02 | 0.304 | 0.812 |
| Rifampicin4 | 0.945 | 0.122 |
| Ethambutol3 | 0.698 | 0.927 |
| Meropenem3 | 0.429 | 0.195 |
| Vancomycin16 | 1.504 | 0.35 |
| Rv2680_day32 | -0.802 | -0.302 |
| H37Rv_KO_MarP | -0.597 | 0.385 |
| hypoxia_3wks | -0.502 | 0.08 |
| hypoxia_6wks | 0.0 | 0.127 |
| glycerol | -0.638 | -0.342 |
| cholesterol | -0.018 | -0.773 |
| AJ | -0.331 | -0.013 |
| Bibs02 | 0.264 | 0.042 |
| Bibs02c | -0.097 | 0.024 |
| BL6 | -0.453 | -0.329 |
| BL6a | -0.36 | -0.476 |
| BXD01 | -0.834 | -0.541 |
| BXD010 | -0.384 | -0.299 |
| BXD011 | -1.007 | -0.084 |
| BXD03 | -0.421 | -0.683 |
| BXD04 | -0.243 | -0.709 |
| BXD05 | 0.303 | -0.87 |
| BXD06 | -0.501 | -0.687 |
| BXD07 | 0.077 | -1.069 |
| BXD08 | -0.341 | -0.75 |
| BXD09 | 0.142 | -0.445 |
| CAST | 0.617 | 0.053 |
| CCcont | -0.359 | -1.014 |
| DS01 | 1.545 | -0.014 |
| DS02 | 0.562 | 0.403 |
| DS04 | 1.789 | 0.304 |
| DS0c | 1.369 | 0.424 |
| GP01 | -1.496 | -0.344 |
| GP02 | -2.318 | -1.4 |
| GP0c | -1.132 | -1.068 |
| NOD | -0.576 | -0.459 |
| NZO | 0.54 | -0.259 |
| PWK | 0.422 | -0.666 |
| H37Rv_KO_CtpC | -0.254 | -0.158 |
| H37Rv_KO_CtpD | 0.667 | -0.277 |
| H37Rv_KO_Rv1272 | 0.161 | -0.598 |
| H37Rv_KO_SugABC | 0.705 | 0.258 |
| H37Rv_KO_MbtN | -1.051 | -0.86 |
| Trans05 | -1.203 | -0.6 |
| macrophage_unactivated | -0.451 | -0.663 |
| IL1 | 0.065 | -0.709 |
| Rapamycin | 0.887 | -0.822 |
| Tcell | -0.169 | -0.417 |
| GMCSF | 0.713 | 0.158 |
| IFNab | -0.045 | -0.946 |
| IFNg | 0.107 | -0.796 |
| IFNg_GMCSF1 | 0.377 | -0.66 |
| Rv1432_day32 | -0.164 | 0.021 |
| Rv1565c_day32 | 0.0 | 0.58 |
| secA2_input | -0.052 | 0.056 |
| delta_Rv3594 | -1.103 | 0.217 |
| delta_Rv3717 | 0.43 | 0.127 |
| delta_Rv3811 | 0.296 | 0.346 |
| delta_Rv0954 | 1.337 | 0.397 |
| PonA1 | 0.322 | 0.525 |
| EccD1_KO | 0.553 | -0.845 |
| EspI_KO | 1.081 | 0.031 |
| PE35_KO | -0.554 | -0.391 |
| PPE68_KO | 0.515 | -0.355 |
| glycerol2 | -0.719 | 0.277 |
| lignocerate | -0.096 | -0.157 |
| oleate | -0.357 | 0.6 |
| phosphatidylcholine | -0.896 | 0.41 |
| acetate | -0.746 | -0.115 |
| glucAc | -0.52 | -0.605 |
| Rv0950ko | 0.377 | 0.6 |
| Rv1096ko | 1.294 | 0.636 |
| Rv3684ko | 1.533 | 0.766 |
| delta_otsA_trehalose | 1.756 | 0.677 |