Top 10 genes with highest correlation to Rv0039c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0631c/recC | (cc=0.5919) | info on Rv0631c/recC |
| Rv0377/- | (cc=0.5349) | info on Rv0377/- |
| Rv3480c/- | (cc=0.4585) | info on Rv3480c/- |
| Rv0797/- | (cc=0.4582) | info on Rv0797/- |
| Rv1681/moeX | (cc=0.4505) | info on Rv1681/moeX |
| Rv0470A/- | (cc=0.4348) | info on Rv0470A/- |
| Rv0447c/ufaA1 | (cc=0.4282) | info on Rv0447c/ufaA1 |
| Rv0400c/fadE7 | (cc=0.4256) | info on Rv0400c/fadE7 |
| Rv0847/lpqS | (cc=0.4244) | info on Rv0847/lpqS |
| Rv3655c/- | (cc=0.423) | info on Rv3655c/- |
Correlation of Rv0039c/- with Rv0847/lpqS
Normalized LFCs for Rv0039c/-:
(description and provenance of datasets)
| Rv0039c/- | Rv0847/lpqS | |
| Fe_supp_jason_reseq | -1.939 | 0.369 |
| low_pH_jason_reseq | 0.517 | -0.164 |
| NO_jason_reseq | -0.42 | -0.394 |
| B6_jason_reseq | 0.009 | 1.092 |
| MHCII_jason_reseq | -0.134 | 1.428 |
| Isoniazid02 | 0.304 | 0.496 |
| Rifampicin4 | 0.945 | 0.252 |
| Ethambutol3 | 0.698 | -0.198 |
| Meropenem3 | 0.429 | 3.046 |
| Vancomycin16 | 1.504 | -0.13 |
| Rv2680_day32 | -0.802 | -1.734 |
| H37Rv_KO_MarP | -0.597 | 1.404 |
| hypoxia_3wks | -0.502 | -0.897 |
| hypoxia_6wks | 0.0 | 0.142 |
| glycerol | -0.638 | -1.34 |
| cholesterol | -0.018 | 0.078 |
| AJ | -0.331 | 0.329 |
| Bibs02 | 0.264 | 2.048 |
| Bibs02c | -0.097 | 2.114 |
| BL6 | -0.453 | 0.807 |
| BL6a | -0.36 | 0.915 |
| BXD01 | -0.834 | -0.457 |
| BXD010 | -0.384 | -0.461 |
| BXD011 | -1.007 | -0.027 |
| BXD03 | -0.421 | 0.168 |
| BXD04 | -0.243 | -0.374 |
| BXD05 | 0.303 | 0.409 |
| BXD06 | -0.501 | -0.298 |
| BXD07 | 0.077 | -0.866 |
| BXD08 | -0.341 | 0.097 |
| BXD09 | 0.142 | 0.47 |
| CAST | 0.617 | 0.435 |
| CCcont | -0.359 | -0.27 |
| DS01 | 1.545 | 1.406 |
| DS02 | 0.562 | 1.174 |
| DS04 | 1.789 | 2.136 |
| DS0c | 1.369 | 2.214 |
| GP01 | -1.496 | -1.12 |
| GP02 | -2.318 | -1.406 |
| GP0c | -1.132 | -1.277 |
| NOD | -0.576 | -0.031 |
| NZO | 0.54 | 1.141 |
| PWK | 0.422 | 0.279 |
| H37Rv_KO_CtpC | -0.254 | 0.85 |
| H37Rv_KO_CtpD | 0.667 | -2.381 |
| H37Rv_KO_Rv1272 | 0.161 | 0.91 |
| H37Rv_KO_SugABC | 0.705 | 0.686 |
| H37Rv_KO_MbtN | -1.051 | 0.585 |
| Trans05 | -1.203 | 0.027 |
| macrophage_unactivated | -0.451 | -0.325 |
| IL1 | 0.065 | 0.575 |
| Rapamycin | 0.887 | 0.703 |
| Tcell | -0.169 | -0.336 |
| GMCSF | 0.713 | 0.697 |
| IFNab | -0.045 | 0.65 |
| IFNg | 0.107 | -0.649 |
| IFNg_GMCSF1 | 0.377 | -0.704 |
| Rv1432_day32 | -0.164 | 1.108 |
| Rv1565c_day32 | 0.0 | -1.061 |
| secA2_input | -0.052 | 0.96 |
| delta_Rv3594 | -1.103 | 0.746 |
| delta_Rv3717 | 0.43 | 1.368 |
| delta_Rv3811 | 0.296 | 1.727 |
| delta_Rv0954 | 1.337 | 2.393 |
| PonA1 | 0.322 | 0.735 |
| EccD1_KO | 0.553 | 0.388 |
| EspI_KO | 1.081 | -0.73 |
| PE35_KO | -0.554 | -0.303 |
| PPE68_KO | 0.515 | -0.451 |
| glycerol2 | -0.719 | -0.472 |
| lignocerate | -0.096 | -0.458 |
| oleate | -0.357 | 0.052 |
| phosphatidylcholine | -0.896 | -0.053 |
| acetate | -0.746 | -0.707 |
| glucAc | -0.52 | -1.18 |
| Rv0950ko | 0.377 | -0.389 |
| Rv1096ko | 1.294 | 0.501 |
| Rv3684ko | 1.533 | -0.422 |
| delta_otsA_trehalose | 1.756 | 2.589 |