Top 10 genes with highest correlation to Rv3885c/eccE2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1500/- | (cc=0.6042) | info on Rv1500/- |
| Rv3153/nuoI | (cc=0.5769) | info on Rv3153/nuoI |
| Rv2430c/PPE41 | (cc=0.5711) | info on Rv2430c/PPE41 |
| Rv3429/PPE59 | (cc=0.5608) | info on Rv3429/PPE59 |
| Rv0989c/grcC2 | (cc=0.5607) | info on Rv0989c/grcC2 |
| Rv1059/- | (cc=0.5575) | info on Rv1059/- |
| Rv3151/nuoG | (cc=0.5486) | info on Rv3151/nuoG |
| Rv0059/- | (cc=0.5436) | info on Rv0059/- |
| Rv2584c/apt | (cc=0.5426) | info on Rv2584c/apt |
| Rv0822c/- | (cc=0.5404) | info on Rv0822c/- |
Correlation of Rv3885c/eccE2 with Rv0989c/grcC2
Normalized LFCs for Rv3885c/eccE2:
(description and provenance of datasets)
| Rv3885c/eccE2 | Rv0989c/grcC2 | |
| Fe_supp_jason_reseq | 0.44 | 2.609 |
| low_pH_jason_reseq | -0.385 | 2.831 |
| NO_jason_reseq | -0.533 | -0.286 |
| B6_jason_reseq | -0.165 | 2.136 |
| MHCII_jason_reseq | 0.452 | 1.703 |
| Isoniazid02 | 0.063 | 0.802 |
| Rifampicin4 | -0.079 | 0.217 |
| Ethambutol3 | 0.102 | 0.289 |
| Meropenem3 | 0.678 | 0.65 |
| Vancomycin16 | 0.114 | 0.032 |
| Rv2680_day32 | 0.511 | 3.948 |
| H37Rv_KO_MarP | 0.243 | -1.853 |
| hypoxia_3wks | 0.0 | -1.519 |
| hypoxia_6wks | 0.487 | 0.451 |
| glycerol | 0.462 | 5.6 |
| cholesterol | -0.15 | 4.139 |
| AJ | 0.133 | 1.239 |
| Bibs02 | 0.787 | 4.78 |
| Bibs02c | 0.844 | 5.162 |
| BL6 | 1.101 | 4.615 |
| BL6a | 1.492 | 5.857 |
| BXD01 | 0.643 | 4.648 |
| BXD010 | 0.568 | 4.045 |
| BXD011 | 1.032 | 4.413 |
| BXD03 | 1.332 | 3.722 |
| BXD04 | 0.432 | 3.589 |
| BXD05 | 0.935 | 4.055 |
| BXD06 | 1.031 | 4.247 |
| BXD07 | 1.253 | 4.611 |
| BXD08 | 0.896 | 4.346 |
| BXD09 | 1.072 | 4.485 |
| CAST | -0.289 | 0.569 |
| CCcont | 1.222 | 4.359 |
| DS01 | 0.986 | 6.0 |
| DS02 | 0.993 | 6.0 |
| DS04 | -0.159 | 5.63 |
| DS0c | 1.226 | 5.646 |
| GP01 | 0.655 | 3.678 |
| GP02 | 1.569 | 3.906 |
| GP0c | 0.559 | 4.303 |
| NOD | -0.547 | -0.163 |
| NZO | -0.295 | 0.892 |
| PWK | 1.04 | 0.689 |
| H37Rv_KO_CtpC | 1.193 | 2.924 |
| H37Rv_KO_CtpD | 1.848 | 4.282 |
| H37Rv_KO_Rv1272 | 0.98 | 4.43 |
| H37Rv_KO_SugABC | 1.39 | 3.675 |
| H37Rv_KO_MbtN | -0.544 | 4.397 |
| Trans05 | -0.135 | 4.538 |
| macrophage_unactivated | -0.224 | 0.96 |
| IL1 | 0.0 | 0.629 |
| Rapamycin | -0.129 | -0.261 |
| Tcell | 0.046 | -0.704 |
| GMCSF | 0.512 | 0.652 |
| IFNab | 0.438 | 1.802 |
| IFNg | 0.144 | 0.179 |
| IFNg_GMCSF1 | 0.0 | -0.408 |
| Rv1432_day32 | 0.525 | 1.675 |
| Rv1565c_day32 | 0.126 | 4.63 |
| secA2_input | -0.56 | -0.294 |
| delta_Rv3594 | -0.823 | -0.381 |
| delta_Rv3717 | -0.836 | 0.414 |
| delta_Rv3811 | -0.629 | -0.211 |
| delta_Rv0954 | -0.506 | 0.074 |
| PonA1 | -0.157 | -0.892 |
| EccD1_KO | 0.585 | 0.069 |
| EspI_KO | 0.143 | 0.456 |
| PE35_KO | -0.265 | -0.642 |
| PPE68_KO | 0.118 | -0.352 |
| glycerol2 | 0.345 | -3.409 |
| lignocerate | 0.257 | -2.795 |
| oleate | 0.058 | -3.254 |
| phosphatidylcholine | 0.14 | -3.214 |
| acetate | -0.178 | 1.935 |
| glucAc | -0.111 | 0.795 |
| Rv0950ko | -0.362 | -0.585 |
| Rv1096ko | 0.087 | 0.136 |
| Rv3684ko | 0.187 | 0.124 |
| delta_otsA_trehalose | 0.833 | -1.113 |