Top 10 genes with highest correlation to Rv3833/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1505c/- | (cc=0.4624) | info on Rv1505c/- |
| Rv2762c/- | (cc=0.4583) | info on Rv2762c/- |
| Rv1607/chaA | (cc=0.4522) | info on Rv1607/chaA |
| Rv0078/- | (cc=0.43) | info on Rv0078/- |
| Rv0078A/- | (cc=0.4271) | info on Rv0078A/- |
| Rv1980c/mpt64 | (cc=0.4206) | info on Rv1980c/mpt64 |
| Rv1176c/- | (cc=0.4175) | info on Rv1176c/- |
| Rv3126c/- | (cc=0.4086) | info on Rv3126c/- |
| Rv1517/- | (cc=0.4043) | info on Rv1517/- |
| Rv1889c/- | (cc=0.397) | info on Rv1889c/- |
Correlation of Rv3833/- with Rv0078A/-
Normalized LFCs for Rv3833/-:
(description and provenance of datasets)
| Rv3833/- | Rv0078A/- | |
| Fe_supp_jason_reseq | -0.461 | -0.272 |
| low_pH_jason_reseq | -0.823 | 0.296 |
| NO_jason_reseq | 0.181 | 0.37 |
| B6_jason_reseq | -0.166 | 0.53 |
| MHCII_jason_reseq | -0.627 | 0.013 |
| Isoniazid02 | -0.631 | 1.139 |
| Rifampicin4 | -0.246 | -0.024 |
| Ethambutol3 | -0.04 | 1.885 |
| Meropenem3 | -0.896 | -0.211 |
| Vancomycin16 | -0.21 | -0.467 |
| Rv2680_day32 | 0.918 | 0.045 |
| H37Rv_KO_MarP | 0.773 | 0.746 |
| hypoxia_3wks | -0.283 | 0.566 |
| hypoxia_6wks | 0.017 | 0.236 |
| glycerol | 0.146 | 0.8 |
| cholesterol | -0.856 | -0.044 |
| AJ | -0.993 | -0.518 |
| Bibs02 | 0.323 | -0.784 |
| Bibs02c | -0.555 | -0.744 |
| BL6 | -0.668 | -1.067 |
| BL6a | 0.743 | 0.278 |
| BXD01 | 0.344 | 0.272 |
| BXD010 | 1.408 | 1.097 |
| BXD011 | 0.353 | 0.287 |
| BXD03 | 0.467 | 0.092 |
| BXD04 | 0.601 | -0.261 |
| BXD05 | 0.821 | 0.408 |
| BXD06 | 0.461 | 0.128 |
| BXD07 | 0.552 | 0.243 |
| BXD08 | 0.667 | -0.383 |
| BXD09 | 0.72 | 0.361 |
| CAST | 0.374 | -0.095 |
| CCcont | -0.547 | -0.686 |
| DS01 | 0.135 | -0.024 |
| DS02 | -0.772 | -1.805 |
| DS04 | -2.361 | -0.832 |
| DS0c | -0.745 | -0.834 |
| GP01 | -0.16 | 0.405 |
| GP02 | -0.295 | -0.273 |
| GP0c | -0.54 | 0.025 |
| NOD | 3.093 | -0.213 |
| NZO | -1.396 | -0.371 |
| PWK | -0.101 | -0.06 |
| H37Rv_KO_CtpC | -0.362 | -0.119 |
| H37Rv_KO_CtpD | 1.105 | 0.167 |
| H37Rv_KO_Rv1272 | -0.64 | -0.626 |
| H37Rv_KO_SugABC | -1.444 | -1.518 |
| H37Rv_KO_MbtN | 1.253 | -0.49 |
| Trans05 | 1.186 | 0.554 |
| macrophage_unactivated | 0.761 | -0.376 |
| IL1 | 0.59 | -0.131 |
| Rapamycin | 0.43 | 0.457 |
| Tcell | 0.13 | 0.443 |
| GMCSF | 1.117 | 0.932 |
| IFNab | 0.992 | 0.411 |
| IFNg | 0.473 | 0.294 |
| IFNg_GMCSF1 | 0.578 | 0.745 |
| Rv1432_day32 | 0.074 | 0.81 |
| Rv1565c_day32 | -0.351 | -0.491 |
| secA2_input | 1.271 | 0.0 |
| delta_Rv3594 | -0.782 | 1.023 |
| delta_Rv3717 | -0.284 | 0.374 |
| delta_Rv3811 | -0.296 | -0.366 |
| delta_Rv0954 | 0.464 | 0.947 |
| PonA1 | -0.097 | -0.382 |
| EccD1_KO | 0.737 | -0.816 |
| EspI_KO | -1.352 | -2.039 |
| PE35_KO | -0.615 | -0.032 |
| PPE68_KO | -0.346 | 0.035 |
| glycerol2 | -0.9 | -0.46 |
| lignocerate | -1.335 | -0.852 |
| oleate | -0.136 | 0.055 |
| phosphatidylcholine | -0.878 | -0.248 |
| acetate | 0.163 | -1.23 |
| glucAc | -1.922 | -1.868 |
| Rv0950ko | 0.274 | -0.597 |
| Rv1096ko | 0.615 | 0.733 |
| Rv3684ko | 0.393 | 0.334 |
| delta_otsA_trehalose | 1.353 | -0.342 |