Top 10 genes with highest correlation to Rv3833/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1505c/- | (cc=0.4624) | info on Rv1505c/- |
| Rv2762c/- | (cc=0.4583) | info on Rv2762c/- |
| Rv1607/chaA | (cc=0.4522) | info on Rv1607/chaA |
| Rv0078/- | (cc=0.43) | info on Rv0078/- |
| Rv0078A/- | (cc=0.4271) | info on Rv0078A/- |
| Rv1980c/mpt64 | (cc=0.4206) | info on Rv1980c/mpt64 |
| Rv1176c/- | (cc=0.4175) | info on Rv1176c/- |
| Rv3126c/- | (cc=0.4086) | info on Rv3126c/- |
| Rv1517/- | (cc=0.4043) | info on Rv1517/- |
| Rv1889c/- | (cc=0.397) | info on Rv1889c/- |
Correlation of Rv3833/- with Rv0078/-
Normalized LFCs for Rv3833/-:
(description and provenance of datasets)
| Rv3833/- | Rv0078/- | |
| Fe_supp_jason_reseq | -0.461 | -0.23 |
| low_pH_jason_reseq | -0.823 | -0.144 |
| NO_jason_reseq | 0.181 | 0.903 |
| B6_jason_reseq | -0.166 | -1.237 |
| MHCII_jason_reseq | -0.627 | -0.301 |
| Isoniazid02 | -0.631 | -1.112 |
| Rifampicin4 | -0.246 | -0.899 |
| Ethambutol3 | -0.04 | -0.074 |
| Meropenem3 | -0.896 | -0.915 |
| Vancomycin16 | -0.21 | -0.565 |
| Rv2680_day32 | 0.918 | 0.235 |
| H37Rv_KO_MarP | 0.773 | 0.093 |
| hypoxia_3wks | -0.283 | 1.284 |
| hypoxia_6wks | 0.017 | 0.288 |
| glycerol | 0.146 | -0.521 |
| cholesterol | -0.856 | -0.789 |
| AJ | -0.993 | -0.239 |
| Bibs02 | 0.323 | -0.397 |
| Bibs02c | -0.555 | -0.54 |
| BL6 | -0.668 | -1.52 |
| BL6a | 0.743 | 0.0 |
| BXD01 | 0.344 | -0.392 |
| BXD010 | 1.408 | -0.564 |
| BXD011 | 0.353 | -0.086 |
| BXD03 | 0.467 | -0.98 |
| BXD04 | 0.601 | -0.372 |
| BXD05 | 0.821 | 0.71 |
| BXD06 | 0.461 | 0.24 |
| BXD07 | 0.552 | 0.0 |
| BXD08 | 0.667 | -0.521 |
| BXD09 | 0.72 | 0.131 |
| CAST | 0.374 | -0.692 |
| CCcont | -0.547 | -1.082 |
| DS01 | 0.135 | 0.221 |
| DS02 | -0.772 | 1.467 |
| DS04 | -2.361 | -1.405 |
| DS0c | -0.745 | 0.0 |
| GP01 | -0.16 | 0.062 |
| GP02 | -0.295 | -0.929 |
| GP0c | -0.54 | -0.231 |
| NOD | 3.093 | 1.048 |
| NZO | -1.396 | -0.98 |
| PWK | -0.101 | -0.065 |
| H37Rv_KO_CtpC | -0.362 | 0.292 |
| H37Rv_KO_CtpD | 1.105 | 2.097 |
| H37Rv_KO_Rv1272 | -0.64 | 0.998 |
| H37Rv_KO_SugABC | -1.444 | -0.067 |
| H37Rv_KO_MbtN | 1.253 | 0.677 |
| Trans05 | 1.186 | 0.161 |
| macrophage_unactivated | 0.761 | 1.042 |
| IL1 | 0.59 | 0.463 |
| Rapamycin | 0.43 | 0.126 |
| Tcell | 0.13 | 1.075 |
| GMCSF | 1.117 | -1.133 |
| IFNab | 0.992 | -0.529 |
| IFNg | 0.473 | 0.794 |
| IFNg_GMCSF1 | 0.578 | 0.606 |
| Rv1432_day32 | 0.074 | 0.454 |
| Rv1565c_day32 | -0.351 | -0.455 |
| secA2_input | 1.271 | -1.597 |
| delta_Rv3594 | -0.782 | -1.71 |
| delta_Rv3717 | -0.284 | -1.047 |
| delta_Rv3811 | -0.296 | -0.846 |
| delta_Rv0954 | 0.464 | -0.447 |
| PonA1 | -0.097 | -1.554 |
| EccD1_KO | 0.737 | -0.316 |
| EspI_KO | -1.352 | -0.493 |
| PE35_KO | -0.615 | 2.053 |
| PPE68_KO | -0.346 | 1.401 |
| glycerol2 | -0.9 | -3.723 |
| lignocerate | -1.335 | -3.328 |
| oleate | -0.136 | -2.786 |
| phosphatidylcholine | -0.878 | -2.598 |
| acetate | 0.163 | -1.386 |
| glucAc | -1.922 | -4.385 |
| Rv0950ko | 0.274 | 1.025 |
| Rv1096ko | 0.615 | 0.917 |
| Rv3684ko | 0.393 | 0.491 |
| delta_otsA_trehalose | 1.353 | 0.77 |