Top 10 genes with highest correlation to Rv3773c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0583c/lpqN | (cc=0.4451) | info on Rv0583c/lpqN |
| Rv2232/ptkA | (cc=0.4283) | info on Rv2232/ptkA |
| Rv0082/- | (cc=0.4271) | info on Rv0082/- |
| Rv0540/- | (cc=0.4265) | info on Rv0540/- |
| Rv1546/- | (cc=0.415) | info on Rv1546/- |
| Rv1351/- | (cc=0.4114) | info on Rv1351/- |
| Rv0679c/- | (cc=0.4102) | info on Rv0679c/- |
| Rv3731/ligC | (cc=0.4068) | info on Rv3731/ligC |
| Rv0984/moaB2 | (cc=0.4018) | info on Rv0984/moaB2 |
| Rv3652/PE_PGRS60 | (cc=0.4004) | info on Rv3652/PE_PGRS60 |
Correlation of Rv3773c/- with Rv2232/ptkA
Normalized LFCs for Rv3773c/-:
(description and provenance of datasets)
| Rv3773c/- | Rv2232/ptkA | |
| Fe_supp_jason_reseq | 0.71 | -1.782 |
| low_pH_jason_reseq | -0.888 | -0.626 |
| NO_jason_reseq | -0.066 | 0.108 |
| B6_jason_reseq | 0.117 | 0.489 |
| MHCII_jason_reseq | 0.888 | 1.444 |
| Isoniazid02 | -0.058 | 0.455 |
| Rifampicin4 | 0.087 | -0.439 |
| Ethambutol3 | 0.202 | 0.638 |
| Meropenem3 | 0.562 | 1.542 |
| Vancomycin16 | -0.053 | -0.43 |
| Rv2680_day32 | 2.002 | 0.947 |
| H37Rv_KO_MarP | -0.32 | 1.226 |
| hypoxia_3wks | 1.057 | 0.112 |
| hypoxia_6wks | 1.32 | -0.311 |
| glycerol | -0.341 | 1.271 |
| cholesterol | -0.168 | 0.0 |
| AJ | -0.655 | 0.156 |
| Bibs02 | -0.775 | 0.588 |
| Bibs02c | 0.821 | 1.441 |
| BL6 | -1.369 | -2.396 |
| BL6a | 0.9 | 0.209 |
| BXD01 | 0.0 | -0.608 |
| BXD010 | -0.587 | -1.641 |
| BXD011 | -0.344 | -0.741 |
| BXD03 | -0.907 | -2.017 |
| BXD04 | 0.242 | 0.131 |
| BXD05 | 0.112 | -0.462 |
| BXD06 | -0.24 | -0.335 |
| BXD07 | 0.282 | -0.448 |
| BXD08 | 0.714 | -0.357 |
| BXD09 | 0.075 | -1.346 |
| CAST | -0.244 | 0.517 |
| CCcont | -0.603 | -2.063 |
| DS01 | -0.311 | 0.71 |
| DS02 | 0.173 | 0.654 |
| DS04 | -0.572 | 0.583 |
| DS0c | -0.229 | 0.06 |
| GP01 | -0.051 | -0.164 |
| GP02 | -0.08 | 0.648 |
| GP0c | -0.086 | -0.421 |
| NOD | 0.021 | 0.604 |
| NZO | -0.9 | 0.309 |
| PWK | 0.5 | -0.492 |
| H37Rv_KO_CtpC | -1.192 | -0.466 |
| H37Rv_KO_CtpD | -2.063 | -1.686 |
| H37Rv_KO_Rv1272 | 0.518 | -0.257 |
| H37Rv_KO_SugABC | -1.382 | 0.529 |
| H37Rv_KO_MbtN | 0.53 | -1.024 |
| Trans05 | -0.4 | -2.026 |
| macrophage_unactivated | -0.473 | -3.592 |
| IL1 | -1.106 | -4.547 |
| Rapamycin | -0.319 | -3.67 |
| Tcell | -0.567 | -2.401 |
| GMCSF | -0.525 | -2.572 |
| IFNab | -0.266 | -2.098 |
| IFNg | -0.665 | -2.603 |
| IFNg_GMCSF1 | -0.449 | -2.181 |
| Rv1432_day32 | 0.674 | 1.119 |
| Rv1565c_day32 | 0.123 | -0.24 |
| secA2_input | 0.175 | 0.969 |
| delta_Rv3594 | -0.281 | -1.048 |
| delta_Rv3717 | 0.15 | -0.394 |
| delta_Rv3811 | -0.683 | -0.498 |
| delta_Rv0954 | -0.694 | -1.16 |
| PonA1 | -0.212 | 0.227 |
| EccD1_KO | -0.368 | -0.388 |
| EspI_KO | 0.653 | 1.8 |
| PE35_KO | -0.079 | -0.254 |
| PPE68_KO | -0.451 | 0.749 |
| glycerol2 | 0.418 | -1.354 |
| lignocerate | -0.319 | -1.695 |
| oleate | 0.695 | -0.315 |
| phosphatidylcholine | 0.41 | -1.217 |
| acetate | -0.411 | -1.445 |
| glucAc | -1.382 | -1.306 |
| Rv0950ko | 1.013 | 0.078 |
| Rv1096ko | 0.437 | -0.793 |
| Rv3684ko | 0.367 | 0.0 |
| delta_otsA_trehalose | 0.842 | 0.83 |