Top 10 genes with highest correlation to Rv3773c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0583c/lpqN | (cc=0.4451) | info on Rv0583c/lpqN |
| Rv2232/ptkA | (cc=0.4283) | info on Rv2232/ptkA |
| Rv0082/- | (cc=0.4271) | info on Rv0082/- |
| Rv0540/- | (cc=0.4265) | info on Rv0540/- |
| Rv1546/- | (cc=0.415) | info on Rv1546/- |
| Rv1351/- | (cc=0.4114) | info on Rv1351/- |
| Rv0679c/- | (cc=0.4102) | info on Rv0679c/- |
| Rv3731/ligC | (cc=0.4068) | info on Rv3731/ligC |
| Rv0984/moaB2 | (cc=0.4018) | info on Rv0984/moaB2 |
| Rv3652/PE_PGRS60 | (cc=0.4004) | info on Rv3652/PE_PGRS60 |
Correlation of Rv3773c/- with Rv0082/-
Normalized LFCs for Rv3773c/-:
(description and provenance of datasets)
| Rv3773c/- | Rv0082/- | |
| Fe_supp_jason_reseq | 0.71 | 0.508 |
| low_pH_jason_reseq | -0.888 | 0.634 |
| NO_jason_reseq | -0.066 | -0.331 |
| B6_jason_reseq | 0.117 | 0.97 |
| MHCII_jason_reseq | 0.888 | 0.315 |
| Isoniazid02 | -0.058 | 0.047 |
| Rifampicin4 | 0.087 | 0.341 |
| Ethambutol3 | 0.202 | -0.168 |
| Meropenem3 | 0.562 | 0.289 |
| Vancomycin16 | -0.053 | -0.088 |
| Rv2680_day32 | 2.002 | 1.173 |
| H37Rv_KO_MarP | -0.32 | -0.03 |
| hypoxia_3wks | 1.057 | -0.55 |
| hypoxia_6wks | 1.32 | 0.758 |
| glycerol | -0.341 | 0.206 |
| cholesterol | -0.168 | -0.012 |
| AJ | -0.655 | 0.052 |
| Bibs02 | -0.775 | 0.0 |
| Bibs02c | 0.821 | 1.278 |
| BL6 | -1.369 | -3.413 |
| BL6a | 0.9 | 0.682 |
| BXD01 | 0.0 | -1.81 |
| BXD010 | -0.587 | -2.5 |
| BXD011 | -0.344 | -0.983 |
| BXD03 | -0.907 | -1.204 |
| BXD04 | 0.242 | -0.505 |
| BXD05 | 0.112 | -0.461 |
| BXD06 | -0.24 | -1.816 |
| BXD07 | 0.282 | -1.478 |
| BXD08 | 0.714 | -0.59 |
| BXD09 | 0.075 | -0.437 |
| CAST | -0.244 | 0.052 |
| CCcont | -0.603 | -2.708 |
| DS01 | -0.311 | -1.341 |
| DS02 | 0.173 | -0.61 |
| DS04 | -0.572 | -0.271 |
| DS0c | -0.229 | -1.604 |
| GP01 | -0.051 | -0.862 |
| GP02 | -0.08 | -0.294 |
| GP0c | -0.086 | -0.922 |
| NOD | 0.021 | -0.088 |
| NZO | -0.9 | 0.718 |
| PWK | 0.5 | 0.145 |
| H37Rv_KO_CtpC | -1.192 | -1.127 |
| H37Rv_KO_CtpD | -2.063 | -0.489 |
| H37Rv_KO_Rv1272 | 0.518 | -3.25 |
| H37Rv_KO_SugABC | -1.382 | -2.038 |
| H37Rv_KO_MbtN | 0.53 | -1.402 |
| Trans05 | -0.4 | -0.194 |
| macrophage_unactivated | -0.473 | -1.553 |
| IL1 | -1.106 | -2.106 |
| Rapamycin | -0.319 | -0.807 |
| Tcell | -0.567 | -1.603 |
| GMCSF | -0.525 | -0.264 |
| IFNab | -0.266 | -1.034 |
| IFNg | -0.665 | -0.406 |
| IFNg_GMCSF1 | -0.449 | -0.207 |
| Rv1432_day32 | 0.674 | 0.0 |
| Rv1565c_day32 | 0.123 | 0.0 |
| secA2_input | 0.175 | -0.307 |
| delta_Rv3594 | -0.281 | -0.765 |
| delta_Rv3717 | 0.15 | -1.1 |
| delta_Rv3811 | -0.683 | -0.431 |
| delta_Rv0954 | -0.694 | 0.434 |
| PonA1 | -0.212 | -0.419 |
| EccD1_KO | -0.368 | -0.835 |
| EspI_KO | 0.653 | -1.349 |
| PE35_KO | -0.079 | -1.135 |
| PPE68_KO | -0.451 | -0.525 |
| glycerol2 | 0.418 | 0.667 |
| lignocerate | -0.319 | -0.078 |
| oleate | 0.695 | 0.916 |
| phosphatidylcholine | 0.41 | 1.648 |
| acetate | -0.411 | 0.199 |
| glucAc | -1.382 | -1.242 |
| Rv0950ko | 1.013 | 0.314 |
| Rv1096ko | 0.437 | 0.983 |
| Rv3684ko | 0.367 | 0.534 |
| delta_otsA_trehalose | 0.842 | -0.071 |