Top 10 genes with highest correlation to Rv3759c/proX:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1729c/- | (cc=0.5882) | info on Rv1729c/- |
| Rv1933c/fadE18 | (cc=0.5833) | info on Rv1933c/fadE18 |
| Rv2824c/- | (cc=0.5609) | info on Rv2824c/- |
| Rv0059/- | (cc=0.5511) | info on Rv0059/- |
| Rv1430/PE16 | (cc=0.5488) | info on Rv1430/PE16 |
| Rv3828c/- | (cc=0.5456) | info on Rv3828c/- |
| Rv2575/- | (cc=0.542) | info on Rv2575/- |
| Rv3150/nuoF | (cc=0.535) | info on Rv3150/nuoF |
| Rv3146/nuoB | (cc=0.5349) | info on Rv3146/nuoB |
| Rv3383c/idsB | (cc=0.5287) | info on Rv3383c/idsB |
Correlation of Rv3759c/proX with Rv2575/-
Normalized LFCs for Rv3759c/proX:
(description and provenance of datasets)
| Rv3759c/proX | Rv2575/- | |
| Fe_supp_jason_reseq | -0.131 | -0.357 |
| low_pH_jason_reseq | -0.139 | 0.176 |
| NO_jason_reseq | -0.648 | 0.373 |
| B6_jason_reseq | -1.588 | -1.261 |
| MHCII_jason_reseq | -0.604 | -0.524 |
| Isoniazid02 | -0.307 | 0.285 |
| Rifampicin4 | -0.198 | -0.398 |
| Ethambutol3 | -0.207 | 0.838 |
| Meropenem3 | -0.043 | 0.375 |
| Vancomycin16 | 0.273 | 0.387 |
| Rv2680_day32 | 0.285 | -1.044 |
| H37Rv_KO_MarP | 0.428 | -0.761 |
| hypoxia_3wks | 0.506 | 1.081 |
| hypoxia_6wks | 1.432 | 1.52 |
| glycerol | 0.695 | -1.204 |
| cholesterol | -0.423 | -0.156 |
| AJ | 0.529 | 0.103 |
| Bibs02 | -1.189 | -0.391 |
| Bibs02c | -0.647 | -0.476 |
| BL6 | 1.359 | 1.269 |
| BL6a | 1.277 | 0.618 |
| BXD01 | 0.617 | 1.404 |
| BXD010 | 0.808 | 0.992 |
| BXD011 | 0.923 | 2.068 |
| BXD03 | 1.553 | 0.728 |
| BXD04 | 1.311 | 1.434 |
| BXD05 | 1.05 | 0.724 |
| BXD06 | 1.42 | 0.913 |
| BXD07 | 1.055 | 1.138 |
| BXD08 | 1.108 | 1.16 |
| BXD09 | 1.695 | 1.548 |
| CAST | -1.143 | -0.624 |
| CCcont | 0.594 | 1.381 |
| DS01 | -0.731 | -0.505 |
| DS02 | -0.458 | -1.95 |
| DS04 | -1.356 | -0.526 |
| DS0c | -0.057 | -0.787 |
| GP01 | -0.767 | -0.082 |
| GP02 | -1.184 | 0.804 |
| GP0c | -1.279 | 0.395 |
| NOD | -0.814 | 0.399 |
| NZO | -0.078 | 0.0 |
| PWK | 0.301 | -0.365 |
| H37Rv_KO_CtpC | 0.371 | -0.302 |
| H37Rv_KO_CtpD | 1.47 | 1.574 |
| H37Rv_KO_Rv1272 | 0.966 | 1.069 |
| H37Rv_KO_SugABC | 1.304 | 2.023 |
| H37Rv_KO_MbtN | -0.917 | -0.844 |
| Trans05 | 1.058 | 0.418 |
| macrophage_unactivated | -0.114 | 0.205 |
| IL1 | 0.682 | 1.017 |
| Rapamycin | 0.491 | 0.491 |
| Tcell | 0.228 | 0.241 |
| GMCSF | 0.272 | 0.533 |
| IFNab | 0.133 | 0.085 |
| IFNg | 0.869 | 0.473 |
| IFNg_GMCSF1 | 0.553 | -0.308 |
| Rv1432_day32 | 0.194 | 0.029 |
| Rv1565c_day32 | 0.881 | 0.319 |
| secA2_input | -1.268 | -0.1 |
| delta_Rv3594 | 0.252 | 0.286 |
| delta_Rv3717 | -1.472 | -0.434 |
| delta_Rv3811 | 0.126 | -0.022 |
| delta_Rv0954 | -0.262 | 1.105 |
| PonA1 | -2.103 | -0.354 |
| EccD1_KO | -0.27 | -1.023 |
| EspI_KO | -0.2 | -0.171 |
| PE35_KO | 0.321 | 0.0 |
| PPE68_KO | -0.112 | -0.656 |
| glycerol2 | -0.223 | 0.429 |
| lignocerate | -0.235 | 0.688 |
| oleate | 0.062 | 0.014 |
| phosphatidylcholine | -0.176 | 0.891 |
| acetate | -0.025 | 0.884 |
| glucAc | -0.536 | 0.515 |
| Rv0950ko | 0.624 | 0.166 |
| Rv1096ko | 0.86 | 0.042 |
| Rv3684ko | 0.128 | -0.046 |
| delta_otsA_trehalose | 0.291 | 3.259 |