Top 10 genes with highest correlation to Rv3759c/proX:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1729c/- | (cc=0.5882) | info on Rv1729c/- |
| Rv1933c/fadE18 | (cc=0.5833) | info on Rv1933c/fadE18 |
| Rv2824c/- | (cc=0.5609) | info on Rv2824c/- |
| Rv0059/- | (cc=0.5511) | info on Rv0059/- |
| Rv1430/PE16 | (cc=0.5488) | info on Rv1430/PE16 |
| Rv3828c/- | (cc=0.5456) | info on Rv3828c/- |
| Rv2575/- | (cc=0.542) | info on Rv2575/- |
| Rv3150/nuoF | (cc=0.535) | info on Rv3150/nuoF |
| Rv3146/nuoB | (cc=0.5349) | info on Rv3146/nuoB |
| Rv3383c/idsB | (cc=0.5287) | info on Rv3383c/idsB |
Correlation of Rv3759c/proX with Rv0059/-
Normalized LFCs for Rv3759c/proX:
(description and provenance of datasets)
| Rv3759c/proX | Rv0059/- | |
| Fe_supp_jason_reseq | -0.131 | 0.371 |
| low_pH_jason_reseq | -0.139 | -0.437 |
| NO_jason_reseq | -0.648 | -0.137 |
| B6_jason_reseq | -1.588 | 0.277 |
| MHCII_jason_reseq | -0.604 | -0.351 |
| Isoniazid02 | -0.307 | -0.655 |
| Rifampicin4 | -0.198 | -0.49 |
| Ethambutol3 | -0.207 | 0.512 |
| Meropenem3 | -0.043 | -0.248 |
| Vancomycin16 | 0.273 | -0.348 |
| Rv2680_day32 | 0.285 | 0.427 |
| H37Rv_KO_MarP | 0.428 | 0.44 |
| hypoxia_3wks | 0.506 | 0.335 |
| hypoxia_6wks | 1.432 | 0.67 |
| glycerol | 0.695 | -0.282 |
| cholesterol | -0.423 | -0.325 |
| AJ | 0.529 | 0.133 |
| Bibs02 | -1.189 | 0.42 |
| Bibs02c | -0.647 | 0.258 |
| BL6 | 1.359 | 0.922 |
| BL6a | 1.277 | 0.578 |
| BXD01 | 0.617 | 0.581 |
| BXD010 | 0.808 | 0.406 |
| BXD011 | 0.923 | 0.991 |
| BXD03 | 1.553 | 0.728 |
| BXD04 | 1.311 | 0.934 |
| BXD05 | 1.05 | 0.697 |
| BXD06 | 1.42 | 1.04 |
| BXD07 | 1.055 | 0.409 |
| BXD08 | 1.108 | 0.702 |
| BXD09 | 1.695 | 0.591 |
| CAST | -1.143 | 0.24 |
| CCcont | 0.594 | 0.212 |
| DS01 | -0.731 | 0.228 |
| DS02 | -0.458 | -0.055 |
| DS04 | -1.356 | -0.025 |
| DS0c | -0.057 | 0.116 |
| GP01 | -0.767 | -0.056 |
| GP02 | -1.184 | -0.661 |
| GP0c | -1.279 | 0.179 |
| NOD | -0.814 | 0.103 |
| NZO | -0.078 | 0.238 |
| PWK | 0.301 | 0.497 |
| H37Rv_KO_CtpC | 0.371 | 0.3 |
| H37Rv_KO_CtpD | 1.47 | 1.255 |
| H37Rv_KO_Rv1272 | 0.966 | 0.537 |
| H37Rv_KO_SugABC | 1.304 | 1.05 |
| H37Rv_KO_MbtN | -0.917 | 0.639 |
| Trans05 | 1.058 | 0.521 |
| macrophage_unactivated | -0.114 | -0.051 |
| IL1 | 0.682 | 0.012 |
| Rapamycin | 0.491 | -0.166 |
| Tcell | 0.228 | 0.27 |
| GMCSF | 0.272 | 0.063 |
| IFNab | 0.133 | -0.06 |
| IFNg | 0.869 | 0.128 |
| IFNg_GMCSF1 | 0.553 | -0.154 |
| Rv1432_day32 | 0.194 | 0.076 |
| Rv1565c_day32 | 0.881 | 0.036 |
| secA2_input | -1.268 | -0.412 |
| delta_Rv3594 | 0.252 | -0.798 |
| delta_Rv3717 | -1.472 | -0.517 |
| delta_Rv3811 | 0.126 | -0.825 |
| delta_Rv0954 | -0.262 | -0.181 |
| PonA1 | -2.103 | -0.713 |
| EccD1_KO | -0.27 | -0.73 |
| EspI_KO | -0.2 | -0.505 |
| PE35_KO | 0.321 | -0.543 |
| PPE68_KO | -0.112 | -0.608 |
| glycerol2 | -0.223 | 0.324 |
| lignocerate | -0.235 | -0.012 |
| oleate | 0.062 | 0.284 |
| phosphatidylcholine | -0.176 | 0.28 |
| acetate | -0.025 | -0.125 |
| glucAc | -0.536 | -0.172 |
| Rv0950ko | 0.624 | 0.205 |
| Rv1096ko | 0.86 | -0.075 |
| Rv3684ko | 0.128 | -0.305 |
| delta_otsA_trehalose | 0.291 | 0.039 |