Top 10 genes with highest correlation to Rv3757c/proW:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0848/cysK2 | (cc=0.5643) | info on Rv0848/cysK2 |
| Rv2395/- | (cc=0.55) | info on Rv2395/- |
| Rv3541c/- | (cc=0.5254) | info on Rv3541c/- |
| Rv0433/- | (cc=0.5194) | info on Rv0433/- |
| Rv0571c/- | (cc=0.4918) | info on Rv0571c/- |
| Rv3480c/- | (cc=0.4894) | info on Rv3480c/- |
| Rv2013/- | (cc=0.4878) | info on Rv2013/- |
| Rv3571/kshB | (cc=0.4862) | info on Rv3571/kshB |
| Rv0325/- | (cc=0.4836) | info on Rv0325/- |
| Rv2831/echA16 | (cc=0.4714) | info on Rv2831/echA16 |
Correlation of Rv3757c/proW with Rv0325/-
Normalized LFCs for Rv3757c/proW:
(description and provenance of datasets)
| Rv3757c/proW | Rv0325/- | |
| Fe_supp_jason_reseq | -0.175 | -0.933 |
| low_pH_jason_reseq | -0.385 | -0.1 |
| NO_jason_reseq | 0.123 | 0.459 |
| B6_jason_reseq | 0.013 | 0.812 |
| MHCII_jason_reseq | 0.09 | 0.663 |
| Isoniazid02 | 2.615 | 2.146 |
| Rifampicin4 | 0.146 | 0.0 |
| Ethambutol3 | 2.071 | 1.867 |
| Meropenem3 | 0.0 | 0.734 |
| Vancomycin16 | 0.143 | 0.196 |
| Rv2680_day32 | -0.225 | 0.179 |
| H37Rv_KO_MarP | 0.581 | 0.226 |
| hypoxia_3wks | 0.431 | 0.742 |
| hypoxia_6wks | 0.599 | 0.286 |
| glycerol | -0.698 | 0.048 |
| cholesterol | -0.378 | 0.406 |
| AJ | -0.424 | -0.04 |
| Bibs02 | 0.103 | 0.155 |
| Bibs02c | -1.031 | -0.755 |
| BL6 | -0.593 | -1.539 |
| BL6a | -1.187 | -0.966 |
| BXD01 | -0.34 | -0.567 |
| BXD010 | -0.1 | -1.32 |
| BXD011 | -0.915 | -0.328 |
| BXD03 | -1.79 | -1.245 |
| BXD04 | -0.874 | -1.3 |
| BXD05 | -0.454 | -1.341 |
| BXD06 | -0.121 | -0.854 |
| BXD07 | -1.06 | -1.477 |
| BXD08 | -0.163 | -0.473 |
| BXD09 | -0.409 | -1.507 |
| CAST | -0.165 | 0.138 |
| CCcont | -0.722 | -1.472 |
| DS01 | -0.111 | -0.151 |
| DS02 | -0.117 | -0.997 |
| DS04 | -0.176 | -0.471 |
| DS0c | -0.352 | 0.273 |
| GP01 | -0.504 | -1.378 |
| GP02 | -1.794 | -0.636 |
| GP0c | -1.253 | -0.421 |
| NOD | 0.939 | -0.099 |
| NZO | -0.909 | 0.156 |
| PWK | 0.362 | -0.004 |
| H37Rv_KO_CtpC | -0.365 | -0.961 |
| H37Rv_KO_CtpD | 0.234 | -0.729 |
| H37Rv_KO_Rv1272 | 0.453 | -1.118 |
| H37Rv_KO_SugABC | -0.544 | -0.529 |
| H37Rv_KO_MbtN | 0.573 | -0.872 |
| Trans05 | 0.303 | -0.003 |
| macrophage_unactivated | 0.259 | -0.735 |
| IL1 | -0.35 | -0.32 |
| Rapamycin | -0.178 | -0.694 |
| Tcell | 0.482 | 0.209 |
| GMCSF | -0.393 | 0.298 |
| IFNab | -0.45 | -0.263 |
| IFNg | -0.703 | -0.069 |
| IFNg_GMCSF1 | 0.217 | 0.16 |
| Rv1432_day32 | 0.385 | -0.11 |
| Rv1565c_day32 | -1.125 | 0.306 |
| secA2_input | 0.632 | -0.47 |
| delta_Rv3594 | 0.525 | -0.236 |
| delta_Rv3717 | 0.765 | 0.121 |
| delta_Rv3811 | 0.199 | 0.126 |
| delta_Rv0954 | 1.381 | 1.239 |
| PonA1 | 0.412 | 0.807 |
| EccD1_KO | 0.467 | -0.25 |
| EspI_KO | 0.194 | 0.117 |
| PE35_KO | -0.178 | -0.263 |
| PPE68_KO | -1.03 | -0.729 |
| glycerol2 | -0.565 | 0.678 |
| lignocerate | -0.662 | 0.183 |
| oleate | -0.027 | 0.872 |
| phosphatidylcholine | -0.564 | 0.657 |
| acetate | -0.61 | -0.374 |
| glucAc | -0.771 | -0.387 |
| Rv0950ko | 0.036 | 0.467 |
| Rv1096ko | 1.037 | -0.341 |
| Rv3684ko | 0.665 | -1.1 |
| delta_otsA_trehalose | 1.725 | -0.601 |