Top 10 genes with highest correlation to Rv3740c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3408/vapC47 | (cc=0.5259) | info on Rv3408/vapC47 |
| Rv1888c/- | (cc=0.481) | info on Rv1888c/- |
| Rv2759c/vapC42 | (cc=0.4382) | info on Rv2759c/vapC42 |
| Rv1781c/malQ | (cc=0.4378) | info on Rv1781c/malQ |
| Rv3094c/- | (cc=0.4347) | info on Rv3094c/- |
| Rv2062c/cobN | (cc=0.4343) | info on Rv2062c/cobN |
| Rv0672/fadE8 | (cc=0.426) | info on Rv0672/fadE8 |
| Rv1586c/- | (cc=0.4236) | info on Rv1586c/- |
| Rv0477/- | (cc=0.4226) | info on Rv0477/- |
| Rv3513c/fadD18 | (cc=0.4109) | info on Rv3513c/fadD18 |
Correlation of Rv3740c/- with Rv2062c/cobN
Normalized LFCs for Rv3740c/-:
(description and provenance of datasets)
| Rv3740c/- | Rv2062c/cobN | |
| Fe_supp_jason_reseq | 0.145 | -0.444 |
| low_pH_jason_reseq | -0.674 | -0.746 |
| NO_jason_reseq | -0.06 | -0.299 |
| B6_jason_reseq | -0.578 | 0.135 |
| MHCII_jason_reseq | -0.239 | -0.388 |
| Isoniazid02 | -0.576 | -0.851 |
| Rifampicin4 | -0.219 | 0.338 |
| Ethambutol3 | -0.366 | -0.946 |
| Meropenem3 | -0.54 | -1.174 |
| Vancomycin16 | -0.39 | -0.451 |
| Rv2680_day32 | 0.536 | 0.197 |
| H37Rv_KO_MarP | 0.538 | -0.106 |
| hypoxia_3wks | -0.199 | -0.175 |
| hypoxia_6wks | -0.618 | 0.384 |
| glycerol | -0.057 | -0.6 |
| cholesterol | -0.061 | 0.017 |
| AJ | -0.192 | 0.355 |
| Bibs02 | 0.11 | 0.298 |
| Bibs02c | 0.036 | 0.32 |
| BL6 | -0.146 | -0.107 |
| BL6a | -0.293 | -0.527 |
| BXD01 | -0.229 | -0.233 |
| BXD010 | -0.38 | -0.719 |
| BXD011 | 0.085 | -1.168 |
| BXD03 | -0.552 | -0.843 |
| BXD04 | -0.499 | -0.598 |
| BXD05 | 0.439 | -0.531 |
| BXD06 | -0.115 | -0.723 |
| BXD07 | -0.114 | -0.477 |
| BXD08 | -0.105 | -0.525 |
| BXD09 | 0.014 | -0.789 |
| CAST | -0.964 | 0.28 |
| CCcont | -0.14 | -0.353 |
| DS01 | 0.291 | 0.212 |
| DS02 | 0.49 | 0.717 |
| DS04 | 0.908 | 0.975 |
| DS0c | 0.465 | -0.185 |
| GP01 | 0.547 | -0.442 |
| GP02 | 1.436 | 0.767 |
| GP0c | -0.316 | -0.469 |
| NOD | -0.626 | -0.192 |
| NZO | 0.04 | 0.0 |
| PWK | -0.443 | -0.219 |
| H37Rv_KO_CtpC | -0.417 | -0.291 |
| H37Rv_KO_CtpD | -0.162 | 0.154 |
| H37Rv_KO_Rv1272 | 0.491 | -0.313 |
| H37Rv_KO_SugABC | 0.25 | 0.658 |
| H37Rv_KO_MbtN | 0.212 | 0.331 |
| Trans05 | 0.352 | 0.172 |
| macrophage_unactivated | -0.218 | -0.65 |
| IL1 | -0.466 | -0.78 |
| Rapamycin | -0.482 | -0.387 |
| Tcell | -0.743 | -0.671 |
| GMCSF | -0.158 | -0.129 |
| IFNab | 0.121 | -0.224 |
| IFNg | -0.147 | -0.551 |
| IFNg_GMCSF1 | 0.167 | 0.434 |
| Rv1432_day32 | 0.203 | 0.458 |
| Rv1565c_day32 | 0.024 | -0.13 |
| secA2_input | 0.124 | -0.545 |
| delta_Rv3594 | -0.404 | -0.135 |
| delta_Rv3717 | -0.339 | 0.122 |
| delta_Rv3811 | -0.013 | -0.086 |
| delta_Rv0954 | 0.417 | -0.322 |
| PonA1 | -0.215 | 0.032 |
| EccD1_KO | 0.362 | 1.046 |
| EspI_KO | -0.391 | 0.528 |
| PE35_KO | -0.359 | 0.169 |
| PPE68_KO | -0.381 | 0.246 |
| glycerol2 | 0.384 | 0.143 |
| lignocerate | 0.1 | 0.55 |
| oleate | 0.544 | 0.088 |
| phosphatidylcholine | 0.197 | 0.224 |
| acetate | -0.231 | 0.479 |
| glucAc | -0.365 | 0.385 |
| Rv0950ko | 0.154 | 0.41 |
| Rv1096ko | 0.317 | 0.464 |
| Rv3684ko | 0.888 | 0.445 |
| delta_otsA_trehalose | -0.356 | -0.953 |