Top 10 genes with highest correlation to Rv3740c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3408/vapC47 | (cc=0.5259) | info on Rv3408/vapC47 |
| Rv1888c/- | (cc=0.481) | info on Rv1888c/- |
| Rv2759c/vapC42 | (cc=0.4382) | info on Rv2759c/vapC42 |
| Rv1781c/malQ | (cc=0.4378) | info on Rv1781c/malQ |
| Rv3094c/- | (cc=0.4347) | info on Rv3094c/- |
| Rv2062c/cobN | (cc=0.4343) | info on Rv2062c/cobN |
| Rv0672/fadE8 | (cc=0.426) | info on Rv0672/fadE8 |
| Rv1586c/- | (cc=0.4236) | info on Rv1586c/- |
| Rv0477/- | (cc=0.4226) | info on Rv0477/- |
| Rv3513c/fadD18 | (cc=0.4109) | info on Rv3513c/fadD18 |
Correlation of Rv3740c/- with Rv0477/-
Normalized LFCs for Rv3740c/-:
(description and provenance of datasets)
| Rv3740c/- | Rv0477/- | |
| Fe_supp_jason_reseq | 0.145 | 0.098 |
| low_pH_jason_reseq | -0.674 | -1.051 |
| NO_jason_reseq | -0.06 | -0.512 |
| B6_jason_reseq | -0.578 | 0.415 |
| MHCII_jason_reseq | -0.239 | 0.42 |
| Isoniazid02 | -0.576 | -0.506 |
| Rifampicin4 | -0.219 | -0.073 |
| Ethambutol3 | -0.366 | -0.427 |
| Meropenem3 | -0.54 | -0.14 |
| Vancomycin16 | -0.39 | -0.554 |
| Rv2680_day32 | 0.536 | -0.178 |
| H37Rv_KO_MarP | 0.538 | 0.302 |
| hypoxia_3wks | -0.199 | 0.267 |
| hypoxia_6wks | -0.618 | -0.125 |
| glycerol | -0.057 | -0.471 |
| cholesterol | -0.061 | 0.363 |
| AJ | -0.192 | -0.195 |
| Bibs02 | 0.11 | -0.162 |
| Bibs02c | 0.036 | 0.841 |
| BL6 | -0.146 | -0.034 |
| BL6a | -0.293 | 0.647 |
| BXD01 | -0.229 | 0.627 |
| BXD010 | -0.38 | 0.095 |
| BXD011 | 0.085 | 0.711 |
| BXD03 | -0.552 | -0.379 |
| BXD04 | -0.499 | 0.398 |
| BXD05 | 0.439 | 0.071 |
| BXD06 | -0.115 | 0.456 |
| BXD07 | -0.114 | 0.236 |
| BXD08 | -0.105 | 0.474 |
| BXD09 | 0.014 | 0.305 |
| CAST | -0.964 | 0.035 |
| CCcont | -0.14 | -0.677 |
| DS01 | 0.291 | 0.236 |
| DS02 | 0.49 | 0.383 |
| DS04 | 0.908 | 0.856 |
| DS0c | 0.465 | 0.426 |
| GP01 | 0.547 | 1.27 |
| GP02 | 1.436 | 1.634 |
| GP0c | -0.316 | 0.372 |
| NOD | -0.626 | -0.802 |
| NZO | 0.04 | 0.993 |
| PWK | -0.443 | 0.577 |
| H37Rv_KO_CtpC | -0.417 | 0.751 |
| H37Rv_KO_CtpD | -0.162 | 0.718 |
| H37Rv_KO_Rv1272 | 0.491 | -0.634 |
| H37Rv_KO_SugABC | 0.25 | 0.701 |
| H37Rv_KO_MbtN | 0.212 | 1.493 |
| Trans05 | 0.352 | 0.698 |
| macrophage_unactivated | -0.218 | -0.347 |
| IL1 | -0.466 | -0.193 |
| Rapamycin | -0.482 | -0.479 |
| Tcell | -0.743 | -0.345 |
| GMCSF | -0.158 | 0.33 |
| IFNab | 0.121 | 0.278 |
| IFNg | -0.147 | 0.102 |
| IFNg_GMCSF1 | 0.167 | 0.236 |
| Rv1432_day32 | 0.203 | 0.275 |
| Rv1565c_day32 | 0.024 | -0.742 |
| secA2_input | 0.124 | 0.358 |
| delta_Rv3594 | -0.404 | -0.107 |
| delta_Rv3717 | -0.339 | -0.133 |
| delta_Rv3811 | -0.013 | -0.671 |
| delta_Rv0954 | 0.417 | -0.721 |
| PonA1 | -0.215 | -1.163 |
| EccD1_KO | 0.362 | 0.082 |
| EspI_KO | -0.391 | 0.274 |
| PE35_KO | -0.359 | -0.866 |
| PPE68_KO | -0.381 | -0.49 |
| glycerol2 | 0.384 | -0.017 |
| lignocerate | 0.1 | -0.809 |
| oleate | 0.544 | 0.768 |
| phosphatidylcholine | 0.197 | -0.51 |
| acetate | -0.231 | -1.049 |
| glucAc | -0.365 | -2.238 |
| Rv0950ko | 0.154 | 1.155 |
| Rv1096ko | 0.317 | 0.166 |
| Rv3684ko | 0.888 | 0.868 |
| delta_otsA_trehalose | -0.356 | 0.487 |