Top 10 genes with highest correlation to Rv3740c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3408/vapC47 | (cc=0.5259) | info on Rv3408/vapC47 |
| Rv1888c/- | (cc=0.481) | info on Rv1888c/- |
| Rv2759c/vapC42 | (cc=0.4382) | info on Rv2759c/vapC42 |
| Rv1781c/malQ | (cc=0.4378) | info on Rv1781c/malQ |
| Rv3094c/- | (cc=0.4347) | info on Rv3094c/- |
| Rv2062c/cobN | (cc=0.4343) | info on Rv2062c/cobN |
| Rv0672/fadE8 | (cc=0.426) | info on Rv0672/fadE8 |
| Rv1586c/- | (cc=0.4236) | info on Rv1586c/- |
| Rv0477/- | (cc=0.4226) | info on Rv0477/- |
| Rv3513c/fadD18 | (cc=0.4109) | info on Rv3513c/fadD18 |
Correlation of Rv3740c/- with Rv3408/vapC47
Normalized LFCs for Rv3740c/-:
(description and provenance of datasets)
| Rv3740c/- | Rv3408/vapC47 | |
| Fe_supp_jason_reseq | 0.145 | 0.426 |
| low_pH_jason_reseq | -0.674 | -0.405 |
| NO_jason_reseq | -0.06 | -0.029 |
| B6_jason_reseq | -0.578 | -0.245 |
| MHCII_jason_reseq | -0.239 | 0.474 |
| Isoniazid02 | -0.576 | -1.005 |
| Rifampicin4 | -0.219 | -0.065 |
| Ethambutol3 | -0.366 | -0.624 |
| Meropenem3 | -0.54 | 0.45 |
| Vancomycin16 | -0.39 | -0.493 |
| Rv2680_day32 | 0.536 | 0.316 |
| H37Rv_KO_MarP | 0.538 | -0.172 |
| hypoxia_3wks | -0.199 | 0.156 |
| hypoxia_6wks | -0.618 | -0.386 |
| glycerol | -0.057 | 0.307 |
| cholesterol | -0.061 | 0.422 |
| AJ | -0.192 | -0.126 |
| Bibs02 | 0.11 | -0.095 |
| Bibs02c | 0.036 | -0.061 |
| BL6 | -0.146 | -0.628 |
| BL6a | -0.293 | -0.121 |
| BXD01 | -0.229 | -0.539 |
| BXD010 | -0.38 | 0.094 |
| BXD011 | 0.085 | -0.151 |
| BXD03 | -0.552 | -0.057 |
| BXD04 | -0.499 | 0.89 |
| BXD05 | 0.439 | 0.141 |
| BXD06 | -0.115 | -0.144 |
| BXD07 | -0.114 | -0.447 |
| BXD08 | -0.105 | -0.041 |
| BXD09 | 0.014 | 0.006 |
| CAST | -0.964 | -0.596 |
| CCcont | -0.14 | -0.288 |
| DS01 | 0.291 | -0.286 |
| DS02 | 0.49 | 0.205 |
| DS04 | 0.908 | 0.611 |
| DS0c | 0.465 | -0.647 |
| GP01 | 0.547 | 0.641 |
| GP02 | 1.436 | 1.269 |
| GP0c | -0.316 | -0.283 |
| NOD | -0.626 | -0.61 |
| NZO | 0.04 | -0.113 |
| PWK | -0.443 | 0.06 |
| H37Rv_KO_CtpC | -0.417 | -0.297 |
| H37Rv_KO_CtpD | -0.162 | 0.023 |
| H37Rv_KO_Rv1272 | 0.491 | -0.107 |
| H37Rv_KO_SugABC | 0.25 | -0.274 |
| H37Rv_KO_MbtN | 0.212 | 0.362 |
| Trans05 | 0.352 | 0.766 |
| macrophage_unactivated | -0.218 | -0.057 |
| IL1 | -0.466 | -0.08 |
| Rapamycin | -0.482 | -0.157 |
| Tcell | -0.743 | -0.642 |
| GMCSF | -0.158 | 0.016 |
| IFNab | 0.121 | 0.112 |
| IFNg | -0.147 | 0.053 |
| IFNg_GMCSF1 | 0.167 | -0.65 |
| Rv1432_day32 | 0.203 | 0.386 |
| Rv1565c_day32 | 0.024 | -0.46 |
| secA2_input | 0.124 | 0.38 |
| delta_Rv3594 | -0.404 | -0.45 |
| delta_Rv3717 | -0.339 | -0.603 |
| delta_Rv3811 | -0.013 | -0.262 |
| delta_Rv0954 | 0.417 | -0.262 |
| PonA1 | -0.215 | -0.085 |
| EccD1_KO | 0.362 | 0.602 |
| EspI_KO | -0.391 | 0.165 |
| PE35_KO | -0.359 | 0.347 |
| PPE68_KO | -0.381 | 0.32 |
| glycerol2 | 0.384 | 0.573 |
| lignocerate | 0.1 | -0.005 |
| oleate | 0.544 | 0.841 |
| phosphatidylcholine | 0.197 | 0.251 |
| acetate | -0.231 | -0.266 |
| glucAc | -0.365 | -0.647 |
| Rv0950ko | 0.154 | 0.124 |
| Rv1096ko | 0.317 | 0.217 |
| Rv3684ko | 0.888 | 0.478 |
| delta_otsA_trehalose | -0.356 | 0.243 |