Top 10 genes with highest correlation to Rv3700c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0435c/- | (cc=0.6094) | info on Rv0435c/- |
| Rv0869c/moaA2 | (cc=0.5622) | info on Rv0869c/moaA2 |
| Rv0470A/- | (cc=0.4793) | info on Rv0470A/- |
| Rv0650/- | (cc=0.474) | info on Rv0650/- |
| Rv0325/- | (cc=0.4684) | info on Rv0325/- |
| Rv0229c/- | (cc=0.4593) | info on Rv0229c/- |
| Rv3371/- | (cc=0.4573) | info on Rv3371/- |
| Rv2116/lppK | (cc=0.4376) | info on Rv2116/lppK |
| Rv0233/nrdB | (cc=0.4354) | info on Rv0233/nrdB |
| Rv3482c/- | (cc=0.4234) | info on Rv3482c/- |
Correlation of Rv3700c/- with Rv3371/-
Normalized LFCs for Rv3700c/-:
(description and provenance of datasets)
| Rv3700c/- | Rv3371/- | |
| Fe_supp_jason_reseq | -0.95 | -0.442 |
| low_pH_jason_reseq | -0.574 | -0.527 |
| NO_jason_reseq | 0.045 | -1.016 |
| B6_jason_reseq | 0.073 | -0.131 |
| MHCII_jason_reseq | 0.782 | 1.576 |
| Isoniazid02 | 0.557 | 1.059 |
| Rifampicin4 | 1.565 | -0.125 |
| Ethambutol3 | 1.165 | 0.518 |
| Meropenem3 | 0.97 | 0.386 |
| Vancomycin16 | 0.931 | 0.451 |
| Rv2680_day32 | -0.64 | -0.074 |
| H37Rv_KO_MarP | 0.395 | -0.151 |
| hypoxia_3wks | 0.794 | 0.159 |
| hypoxia_6wks | 0.136 | 0.125 |
| glycerol | 0.48 | 0.696 |
| cholesterol | -0.226 | 0.55 |
| AJ | 0.592 | 0.881 |
| Bibs02 | 1.016 | 0.587 |
| Bibs02c | 0.262 | 0.033 |
| BL6 | 0.181 | -0.222 |
| BL6a | -0.61 | -0.24 |
| BXD01 | 0.483 | 0.197 |
| BXD010 | 0.315 | -0.887 |
| BXD011 | 0.069 | -0.66 |
| BXD03 | -0.565 | 0.107 |
| BXD04 | -1.041 | 0.152 |
| BXD05 | -1.167 | -0.56 |
| BXD06 | -0.58 | -0.555 |
| BXD07 | -0.674 | -0.329 |
| BXD08 | -0.061 | -0.137 |
| BXD09 | -0.684 | -0.145 |
| CAST | 0.289 | 0.507 |
| CCcont | -0.6 | -0.416 |
| DS01 | 1.153 | 1.15 |
| DS02 | -0.339 | 0.449 |
| DS04 | 0.374 | 1.275 |
| DS0c | 0.437 | 0.448 |
| GP01 | -1.409 | -0.411 |
| GP02 | -0.482 | -0.525 |
| GP0c | 0.542 | -0.573 |
| NOD | 1.538 | 0.21 |
| NZO | -0.471 | 0.0 |
| PWK | 0.227 | 0.483 |
| H37Rv_KO_CtpC | -0.706 | -0.798 |
| H37Rv_KO_CtpD | -0.23 | -2.012 |
| H37Rv_KO_Rv1272 | -1.374 | 0.519 |
| H37Rv_KO_SugABC | -0.398 | -0.084 |
| H37Rv_KO_MbtN | -0.161 | -0.781 |
| Trans05 | -0.309 | -0.905 |
| macrophage_unactivated | 0.079 | 0.537 |
| IL1 | 0.359 | 0.504 |
| Rapamycin | 0.715 | 0.988 |
| Tcell | 1.711 | 0.759 |
| GMCSF | -0.137 | 0.095 |
| IFNab | 0.076 | -0.112 |
| IFNg | 1.307 | 0.187 |
| IFNg_GMCSF1 | 1.185 | 1.191 |
| Rv1432_day32 | -0.265 | -0.598 |
| Rv1565c_day32 | 0.644 | 0.0 |
| secA2_input | 0.6 | 0.866 |
| delta_Rv3594 | -0.739 | 0.728 |
| delta_Rv3717 | -0.252 | 0.482 |
| delta_Rv3811 | -0.134 | 0.091 |
| delta_Rv0954 | 0.454 | 1.031 |
| PonA1 | 0.383 | 1.624 |
| EccD1_KO | 0.122 | 0.0 |
| EspI_KO | -0.071 | 1.081 |
| PE35_KO | -0.703 | 0.0 |
| PPE68_KO | -0.726 | -0.358 |
| glycerol2 | -0.02 | 0.087 |
| lignocerate | -0.104 | -0.1 |
| oleate | 0.132 | 0.665 |
| phosphatidylcholine | 0.183 | 0.21 |
| acetate | -0.07 | -0.495 |
| glucAc | -0.387 | -0.646 |
| Rv0950ko | -0.19 | -0.47 |
| Rv1096ko | 1.915 | 0.217 |
| Rv3684ko | 0.91 | 0.881 |
| delta_otsA_trehalose | -1.201 | -0.512 |