Top 10 genes with highest correlation to Rv3700c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0435c/- | (cc=0.6094) | info on Rv0435c/- |
| Rv0869c/moaA2 | (cc=0.5622) | info on Rv0869c/moaA2 |
| Rv0470A/- | (cc=0.4793) | info on Rv0470A/- |
| Rv0650/- | (cc=0.474) | info on Rv0650/- |
| Rv0325/- | (cc=0.4684) | info on Rv0325/- |
| Rv0229c/- | (cc=0.4593) | info on Rv0229c/- |
| Rv3371/- | (cc=0.4573) | info on Rv3371/- |
| Rv2116/lppK | (cc=0.4376) | info on Rv2116/lppK |
| Rv0233/nrdB | (cc=0.4354) | info on Rv0233/nrdB |
| Rv3482c/- | (cc=0.4234) | info on Rv3482c/- |
Correlation of Rv3700c/- with Rv0233/nrdB
Normalized LFCs for Rv3700c/-:
(description and provenance of datasets)
| Rv3700c/- | Rv0233/nrdB | |
| Fe_supp_jason_reseq | -0.95 | 0.2 |
| low_pH_jason_reseq | -0.574 | -0.095 |
| NO_jason_reseq | 0.045 | -0.131 |
| B6_jason_reseq | 0.073 | 0.854 |
| MHCII_jason_reseq | 0.782 | 1.421 |
| Isoniazid02 | 0.557 | 0.322 |
| Rifampicin4 | 1.565 | -0.192 |
| Ethambutol3 | 1.165 | 0.154 |
| Meropenem3 | 0.97 | 0.291 |
| Vancomycin16 | 0.931 | -0.443 |
| Rv2680_day32 | -0.64 | 0.614 |
| H37Rv_KO_MarP | 0.395 | 0.167 |
| hypoxia_3wks | 0.794 | -0.159 |
| hypoxia_6wks | 0.136 | 0.192 |
| glycerol | 0.48 | -0.973 |
| cholesterol | -0.226 | -0.39 |
| AJ | 0.592 | 0.316 |
| Bibs02 | 1.016 | 0.891 |
| Bibs02c | 0.262 | 0.543 |
| BL6 | 0.181 | -1.416 |
| BL6a | -0.61 | -0.575 |
| BXD01 | 0.483 | -0.696 |
| BXD010 | 0.315 | -0.537 |
| BXD011 | 0.069 | -0.693 |
| BXD03 | -0.565 | -1.509 |
| BXD04 | -1.041 | -0.539 |
| BXD05 | -1.167 | -0.41 |
| BXD06 | -0.58 | -0.887 |
| BXD07 | -0.674 | -1.157 |
| BXD08 | -0.061 | -0.354 |
| BXD09 | -0.684 | -0.919 |
| CAST | 0.289 | -0.038 |
| CCcont | -0.6 | -1.564 |
| DS01 | 1.153 | 1.025 |
| DS02 | -0.339 | 0.748 |
| DS04 | 0.374 | 0.933 |
| DS0c | 0.437 | 0.548 |
| GP01 | -1.409 | -0.911 |
| GP02 | -0.482 | -0.359 |
| GP0c | 0.542 | -0.382 |
| NOD | 1.538 | 0.605 |
| NZO | -0.471 | 0.12 |
| PWK | 0.227 | -0.242 |
| H37Rv_KO_CtpC | -0.706 | -1.19 |
| H37Rv_KO_CtpD | -0.23 | -0.803 |
| H37Rv_KO_Rv1272 | -1.374 | -0.626 |
| H37Rv_KO_SugABC | -0.398 | -0.316 |
| H37Rv_KO_MbtN | -0.161 | -0.755 |
| Trans05 | -0.309 | -0.13 |
| macrophage_unactivated | 0.079 | -1.083 |
| IL1 | 0.359 | -0.193 |
| Rapamycin | 0.715 | -0.786 |
| Tcell | 1.711 | -0.046 |
| GMCSF | -0.137 | 0.459 |
| IFNab | 0.076 | -0.478 |
| IFNg | 1.307 | 0.38 |
| IFNg_GMCSF1 | 1.185 | -0.396 |
| Rv1432_day32 | -0.265 | 0.042 |
| Rv1565c_day32 | 0.644 | 0.963 |
| secA2_input | 0.6 | 0.106 |
| delta_Rv3594 | -0.739 | -0.399 |
| delta_Rv3717 | -0.252 | -0.766 |
| delta_Rv3811 | -0.134 | -0.589 |
| delta_Rv0954 | 0.454 | -0.252 |
| PonA1 | 0.383 | -0.066 |
| EccD1_KO | 0.122 | -0.286 |
| EspI_KO | -0.071 | -0.368 |
| PE35_KO | -0.703 | -1.041 |
| PPE68_KO | -0.726 | -0.483 |
| glycerol2 | -0.02 | -0.911 |
| lignocerate | -0.104 | -0.609 |
| oleate | 0.132 | -0.404 |
| phosphatidylcholine | 0.183 | -0.598 |
| acetate | -0.07 | -1.107 |
| glucAc | -0.387 | -1.029 |
| Rv0950ko | -0.19 | 0.308 |
| Rv1096ko | 1.915 | 0.805 |
| Rv3684ko | 0.91 | 0.259 |
| delta_otsA_trehalose | -1.201 | 0.437 |