Top 10 genes with highest correlation to Rv3697c/vapC48:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2841c/nusA | (cc=0.6194) | info on Rv2841c/nusA |
| Rv3749c/- | (cc=0.6188) | info on Rv3749c/- |
| Rv3142c/- | (cc=0.6004) | info on Rv3142c/- |
| Rv0515/- | (cc=0.588) | info on Rv0515/- |
| Rv2647/- | (cc=0.5784) | info on Rv2647/- |
| Rv3018c/PPE46 | (cc=0.575) | info on Rv3018c/PPE46 |
| Rv1913/- | (cc=0.5661) | info on Rv1913/- |
| Rv2808/- | (cc=0.5575) | info on Rv2808/- |
| Rv2105/- | (cc=0.5507) | info on Rv2105/- |
| Rv0336/- | (cc=0.536) | info on Rv0336/- |
Correlation of Rv3697c/vapC48 with Rv2647/-
Normalized LFCs for Rv3697c/vapC48:
(description and provenance of datasets)
| Rv3697c/vapC48 | Rv2647/- | |
| Fe_supp_jason_reseq | 1.004 | -0.207 |
| low_pH_jason_reseq | 0.248 | 0.333 |
| NO_jason_reseq | 0.257 | 0.407 |
| B6_jason_reseq | 0.432 | -0.24 |
| MHCII_jason_reseq | 0.625 | 1.765 |
| Isoniazid02 | 0.127 | -0.519 |
| Rifampicin4 | 0.986 | 0.639 |
| Ethambutol3 | 0.259 | 0.0 |
| Meropenem3 | 0.623 | 0.264 |
| Vancomycin16 | 0.849 | 0.398 |
| Rv2680_day32 | -0.608 | -1.922 |
| H37Rv_KO_MarP | 0.141 | 1.187 |
| hypoxia_3wks | -0.187 | 0.431 |
| hypoxia_6wks | 0.599 | -1.324 |
| glycerol | -1.059 | -0.992 |
| cholesterol | -0.18 | -0.499 |
| AJ | 1.141 | 0.193 |
| Bibs02 | 0.148 | 0.242 |
| Bibs02c | 1.023 | 0.47 |
| BL6 | 0.43 | 0.574 |
| BL6a | 0.946 | 0.244 |
| BXD01 | 1.006 | 0.082 |
| BXD010 | 0.63 | -2.241 |
| BXD011 | 0.497 | -1.039 |
| BXD03 | 0.265 | -1.31 |
| BXD04 | 0.173 | -0.113 |
| BXD05 | 0.037 | -1.95 |
| BXD06 | 0.352 | -0.727 |
| BXD07 | 0.319 | -0.159 |
| BXD08 | 0.723 | 1.034 |
| BXD09 | 0.615 | -1.524 |
| CAST | 0.929 | 0.908 |
| CCcont | 0.578 | 0.016 |
| DS01 | 0.7 | 0.767 |
| DS02 | 1.311 | 0.581 |
| DS04 | 0.926 | -2.046 |
| DS0c | 1.073 | -0.652 |
| GP01 | 0.32 | -0.011 |
| GP02 | 1.123 | -1.364 |
| GP0c | 0.655 | -0.214 |
| NOD | 1.15 | 0.382 |
| NZO | 0.351 | -0.571 |
| PWK | 1.223 | 1.367 |
| H37Rv_KO_CtpC | 1.453 | 0.95 |
| H37Rv_KO_CtpD | 0.915 | -2.291 |
| H37Rv_KO_Rv1272 | -0.06 | -1.87 |
| H37Rv_KO_SugABC | 1.48 | -0.959 |
| H37Rv_KO_MbtN | 0.337 | -1.253 |
| Trans05 | 1.053 | -1.588 |
| macrophage_unactivated | -0.675 | -1.846 |
| IL1 | -1.053 | -3.028 |
| Rapamycin | -1.789 | -3.689 |
| Tcell | -0.534 | -2.333 |
| GMCSF | -1.595 | -3.303 |
| IFNab | -0.98 | -2.603 |
| IFNg | -0.676 | -2.616 |
| IFNg_GMCSF1 | -1.254 | -1.37 |
| Rv1432_day32 | -1.395 | -0.763 |
| Rv1565c_day32 | 0.684 | 0.58 |
| secA2_input | -0.368 | -0.576 |
| delta_Rv3594 | 0.021 | -0.642 |
| delta_Rv3717 | -0.279 | -0.505 |
| delta_Rv3811 | -0.042 | -1.222 |
| delta_Rv0954 | -0.239 | -0.444 |
| PonA1 | -0.059 | -0.726 |
| EccD1_KO | -0.576 | -1.092 |
| EspI_KO | 0.02 | -1.991 |
| PE35_KO | -0.257 | -0.362 |
| PPE68_KO | -0.307 | -0.128 |
| glycerol2 | 0.743 | 0.51 |
| lignocerate | 1.221 | 0.037 |
| oleate | 0.95 | 0.516 |
| phosphatidylcholine | 1.308 | 0.465 |
| acetate | 0.329 | -0.209 |
| glucAc | 0.432 | 0.158 |
| Rv0950ko | 1.077 | -0.488 |
| Rv1096ko | 0.033 | -0.133 |
| Rv3684ko | 0.701 | -0.95 |
| delta_otsA_trehalose | -0.143 | -2.038 |