Top 10 genes with highest correlation to Rv3639c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0839/- | (cc=0.4798) | info on Rv0839/- |
| Rv0915c/PPE14 | (cc=0.397) | info on Rv0915c/PPE14 |
| Rv0864/moaC2 | (cc=0.3655) | info on Rv0864/moaC2 |
| Rv0912/- | (cc=0.3631) | info on Rv0912/- |
| Rv0630c/recB | (cc=0.3611) | info on Rv0630c/recB |
| Rv0661c/vapC7 | (cc=0.3577) | info on Rv0661c/vapC7 |
| Rv3055/- | (cc=0.3489) | info on Rv3055/- |
| Rv3628/ppa | (cc=0.3467) | info on Rv3628/ppa |
| Rv3585/radA | (cc=0.3428) | info on Rv3585/radA |
| Rv1975/- | (cc=0.3411) | info on Rv1975/- |
Correlation of Rv3639c/- with Rv3055/-
Normalized LFCs for Rv3639c/-:
(description and provenance of datasets)
| Rv3639c/- | Rv3055/- | |
| Fe_supp_jason_reseq | 0.983 | -0.038 |
| low_pH_jason_reseq | -1.625 | -1.819 |
| NO_jason_reseq | -0.662 | -1.748 |
| B6_jason_reseq | -1.352 | -0.069 |
| MHCII_jason_reseq | 0.135 | -0.203 |
| Isoniazid02 | 0.575 | 0.0 |
| Rifampicin4 | -0.374 | 0.306 |
| Ethambutol3 | 0.354 | 0.95 |
| Meropenem3 | -0.012 | 1.065 |
| Vancomycin16 | 0.133 | 0.554 |
| Rv2680_day32 | 1.398 | 0.761 |
| H37Rv_KO_MarP | 0.264 | 0.354 |
| hypoxia_3wks | -0.718 | -0.347 |
| hypoxia_6wks | -0.284 | -1.042 |
| glycerol | 0.669 | -0.515 |
| cholesterol | 0.153 | -1.488 |
| AJ | 0.076 | 0.042 |
| Bibs02 | -0.261 | -0.523 |
| Bibs02c | 0.459 | -0.703 |
| BL6 | -0.442 | -0.993 |
| BL6a | 0.703 | -0.894 |
| BXD01 | -0.755 | -0.426 |
| BXD010 | 0.247 | -1.402 |
| BXD011 | -0.134 | -0.563 |
| BXD03 | -0.784 | -0.923 |
| BXD04 | -0.309 | 0.632 |
| BXD05 | 0.259 | -0.967 |
| BXD06 | -0.108 | -1.168 |
| BXD07 | -0.198 | -0.913 |
| BXD08 | 0.014 | -1.242 |
| BXD09 | 0.383 | -1.333 |
| CAST | 0.075 | 0.123 |
| CCcont | 0.274 | -0.225 |
| DS01 | -0.108 | -0.958 |
| DS02 | 0.647 | -1.966 |
| DS04 | -0.458 | 0.298 |
| DS0c | 0.094 | 0.013 |
| GP01 | 1.928 | 0.765 |
| GP02 | -0.405 | 2.108 |
| GP0c | 1.21 | 1.447 |
| NOD | 1.899 | -0.718 |
| NZO | 1.389 | -0.571 |
| PWK | 0.742 | -0.692 |
| H37Rv_KO_CtpC | -0.093 | -1.75 |
| H37Rv_KO_CtpD | 1.045 | -0.895 |
| H37Rv_KO_Rv1272 | 0.091 | -1.317 |
| H37Rv_KO_SugABC | 0.42 | -0.799 |
| H37Rv_KO_MbtN | -0.414 | -0.993 |
| Trans05 | -0.89 | -1.181 |
| macrophage_unactivated | 0.982 | 0.593 |
| IL1 | 0.43 | -0.528 |
| Rapamycin | 0.632 | 0.052 |
| Tcell | 0.046 | -0.58 |
| GMCSF | 0.908 | 0.613 |
| IFNab | 0.478 | -1.088 |
| IFNg | 0.486 | -2.248 |
| IFNg_GMCSF1 | 1.379 | 0.817 |
| Rv1432_day32 | -0.812 | -1.304 |
| Rv1565c_day32 | -0.024 | 0.147 |
| secA2_input | -0.396 | 1.935 |
| delta_Rv3594 | -0.431 | -1.837 |
| delta_Rv3717 | -0.813 | -1.419 |
| delta_Rv3811 | -0.358 | -1.404 |
| delta_Rv0954 | -1.994 | -1.24 |
| PonA1 | -0.267 | -0.39 |
| EccD1_KO | 0.562 | 2.911 |
| EspI_KO | 0.137 | 1.517 |
| PE35_KO | 1.324 | 2.214 |
| PPE68_KO | 1.753 | 3.443 |
| glycerol2 | 0.563 | 1.407 |
| lignocerate | 0.184 | 0.838 |
| oleate | -0.096 | 0.502 |
| phosphatidylcholine | 0.228 | 1.241 |
| acetate | -0.833 | 0.083 |
| glucAc | 0.168 | 0.164 |
| Rv0950ko | 0.504 | -0.727 |
| Rv1096ko | -0.06 | 1.716 |
| Rv3684ko | 0.658 | 0.252 |
| delta_otsA_trehalose | 0.654 | -0.491 |