Top 10 genes with highest correlation to Rv3639c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0839/- | (cc=0.4798) | info on Rv0839/- |
| Rv0915c/PPE14 | (cc=0.397) | info on Rv0915c/PPE14 |
| Rv0864/moaC2 | (cc=0.3655) | info on Rv0864/moaC2 |
| Rv0912/- | (cc=0.3631) | info on Rv0912/- |
| Rv0630c/recB | (cc=0.3611) | info on Rv0630c/recB |
| Rv0661c/vapC7 | (cc=0.3577) | info on Rv0661c/vapC7 |
| Rv3055/- | (cc=0.3489) | info on Rv3055/- |
| Rv3628/ppa | (cc=0.3467) | info on Rv3628/ppa |
| Rv3585/radA | (cc=0.3428) | info on Rv3585/radA |
| Rv1975/- | (cc=0.3411) | info on Rv1975/- |
Correlation of Rv3639c/- with Rv0864/moaC2
Normalized LFCs for Rv3639c/-:
(description and provenance of datasets)
| Rv3639c/- | Rv0864/moaC2 | |
| Fe_supp_jason_reseq | 0.983 | 0.128 |
| low_pH_jason_reseq | -1.625 | -0.31 |
| NO_jason_reseq | -0.662 | 0.071 |
| B6_jason_reseq | -1.352 | -2.9 |
| MHCII_jason_reseq | 0.135 | -0.034 |
| Isoniazid02 | 0.575 | -0.192 |
| Rifampicin4 | -0.374 | -0.26 |
| Ethambutol3 | 0.354 | -0.161 |
| Meropenem3 | -0.012 | 0.987 |
| Vancomycin16 | 0.133 | 0.57 |
| Rv2680_day32 | 1.398 | 0.215 |
| H37Rv_KO_MarP | 0.264 | 1.013 |
| hypoxia_3wks | -0.718 | -0.028 |
| hypoxia_6wks | -0.284 | -0.635 |
| glycerol | 0.669 | 0.266 |
| cholesterol | 0.153 | -0.218 |
| AJ | 0.076 | -0.721 |
| Bibs02 | -0.261 | -0.363 |
| Bibs02c | 0.459 | -0.246 |
| BL6 | -0.442 | -0.075 |
| BL6a | 0.703 | 0.156 |
| BXD01 | -0.755 | -0.136 |
| BXD010 | 0.247 | 0.704 |
| BXD011 | -0.134 | 0.207 |
| BXD03 | -0.784 | -0.15 |
| BXD04 | -0.309 | -0.606 |
| BXD05 | 0.259 | 0.669 |
| BXD06 | -0.108 | 0.061 |
| BXD07 | -0.198 | 0.131 |
| BXD08 | 0.014 | -0.361 |
| BXD09 | 0.383 | 0.276 |
| CAST | 0.075 | -0.983 |
| CCcont | 0.274 | 0.301 |
| DS01 | -0.108 | -0.293 |
| DS02 | 0.647 | 0.384 |
| DS04 | -0.458 | 0.677 |
| DS0c | 0.094 | 0.519 |
| GP01 | 1.928 | -0.493 |
| GP02 | -0.405 | -0.081 |
| GP0c | 1.21 | -0.353 |
| NOD | 1.899 | 2.301 |
| NZO | 1.389 | -0.513 |
| PWK | 0.742 | -0.07 |
| H37Rv_KO_CtpC | -0.093 | -0.651 |
| H37Rv_KO_CtpD | 1.045 | -0.363 |
| H37Rv_KO_Rv1272 | 0.091 | -0.067 |
| H37Rv_KO_SugABC | 0.42 | -0.972 |
| H37Rv_KO_MbtN | -0.414 | 0.602 |
| Trans05 | -0.89 | -0.678 |
| macrophage_unactivated | 0.982 | 0.603 |
| IL1 | 0.43 | -0.397 |
| Rapamycin | 0.632 | -0.018 |
| Tcell | 0.046 | -0.505 |
| GMCSF | 0.908 | 0.663 |
| IFNab | 0.478 | 1.119 |
| IFNg | 0.486 | 0.569 |
| IFNg_GMCSF1 | 1.379 | 0.493 |
| Rv1432_day32 | -0.812 | -0.415 |
| Rv1565c_day32 | -0.024 | 0.063 |
| secA2_input | -0.396 | -0.598 |
| delta_Rv3594 | -0.431 | -0.044 |
| delta_Rv3717 | -0.813 | -0.313 |
| delta_Rv3811 | -0.358 | 0.164 |
| delta_Rv0954 | -1.994 | -0.028 |
| PonA1 | -0.267 | -0.709 |
| EccD1_KO | 0.562 | 0.299 |
| EspI_KO | 0.137 | 0.374 |
| PE35_KO | 1.324 | 0.289 |
| PPE68_KO | 1.753 | 0.189 |
| glycerol2 | 0.563 | 0.258 |
| lignocerate | 0.184 | 0.588 |
| oleate | -0.096 | 0.413 |
| phosphatidylcholine | 0.228 | 0.471 |
| acetate | -0.833 | -0.432 |
| glucAc | 0.168 | 0.125 |
| Rv0950ko | 0.504 | 0.193 |
| Rv1096ko | -0.06 | 0.923 |
| Rv3684ko | 0.658 | 0.023 |
| delta_otsA_trehalose | 0.654 | 0.191 |