Top 10 genes with highest correlation to Rv3631/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3632/- | (cc=0.7919) | info on Rv3632/- |
| Rv3779/- | (cc=0.7896) | info on Rv3779/- |
| Rv1096/- | (cc=0.549) | info on Rv1096/- |
| Rv1244/lpqZ | (cc=0.4744) | info on Rv1244/lpqZ |
| Rv1747/- | (cc=0.4695) | info on Rv1747/- |
| Rv0199/- | (cc=0.4556) | info on Rv0199/- |
| Rv0200/- | (cc=0.4355) | info on Rv0200/- |
| Rv1238/sugC | (cc=0.4052) | info on Rv1238/sugC |
| Rv3494c/mce4F | (cc=0.4028) | info on Rv3494c/mce4F |
| Rv3560c/fadE30 | (cc=0.3914) | info on Rv3560c/fadE30 |
Correlation of Rv3631/- with Rv3632/-
Normalized LFCs for Rv3631/-:
(description and provenance of datasets)
| Rv3631/- | Rv3632/- | |
| Fe_supp_jason_reseq | 0.725 | -0.483 |
| low_pH_jason_reseq | 1.63 | 0.577 |
| NO_jason_reseq | 1.72 | 1.137 |
| B6_jason_reseq | -0.431 | 0.367 |
| MHCII_jason_reseq | -3.014 | -2.782 |
| Isoniazid02 | 0.386 | -0.033 |
| Rifampicin4 | -0.639 | -0.347 |
| Ethambutol3 | -2.141 | -2.416 |
| Meropenem3 | -1.186 | -1.654 |
| Vancomycin16 | -6.0 | -6.0 |
| Rv2680_day32 | 0.131 | -0.883 |
| H37Rv_KO_MarP | -0.841 | -0.521 |
| hypoxia_3wks | 1.503 | 2.967 |
| hypoxia_6wks | 2.994 | 2.873 |
| glycerol | -1.21 | -1.058 |
| cholesterol | -1.729 | -1.491 |
| AJ | -2.538 | -1.215 |
| Bibs02 | -2.69 | -2.662 |
| Bibs02c | -4.013 | -2.514 |
| BL6 | -0.934 | -2.497 |
| BL6a | -1.718 | -2.307 |
| BXD01 | -0.17 | -0.898 |
| BXD010 | 1.271 | -1.178 |
| BXD011 | -0.073 | -1.493 |
| BXD03 | -0.062 | -1.349 |
| BXD04 | -0.647 | -0.549 |
| BXD05 | 0.456 | -1.277 |
| BXD06 | -1.028 | -0.752 |
| BXD07 | 0.329 | -1.407 |
| BXD08 | -1.334 | -0.444 |
| BXD09 | -0.219 | -1.679 |
| CAST | -1.72 | -0.973 |
| CCcont | 0.173 | -0.753 |
| DS01 | -3.08 | -3.858 |
| DS02 | -2.521 | -1.731 |
| DS04 | -2.003 | -3.611 |
| DS0c | -0.394 | -1.661 |
| GP01 | -1.049 | -0.771 |
| GP02 | -1.596 | -1.536 |
| GP0c | 0.32 | -0.897 |
| NOD | 0.169 | 0.742 |
| NZO | 0.211 | -0.236 |
| PWK | 0.5 | -0.655 |
| H37Rv_KO_CtpC | -1.63 | -1.703 |
| H37Rv_KO_CtpD | -0.759 | -2.702 |
| H37Rv_KO_Rv1272 | -1.415 | -0.896 |
| H37Rv_KO_SugABC | -1.711 | -2.561 |
| H37Rv_KO_MbtN | -1.516 | -1.794 |
| Trans05 | -2.257 | -0.529 |
| macrophage_unactivated | 0.739 | 0.492 |
| IL1 | 1.219 | 1.548 |
| Rapamycin | 0.764 | 0.172 |
| Tcell | 0.811 | 0.746 |
| GMCSF | 0.805 | 0.605 |
| IFNab | -1.98 | -1.11 |
| IFNg | -0.535 | -0.318 |
| IFNg_GMCSF1 | -1.012 | -0.182 |
| Rv1432_day32 | -1.919 | -1.501 |
| Rv1565c_day32 | -2.941 | -2.323 |
| secA2_input | -1.537 | 0.368 |
| delta_Rv3594 | 0.0 | -0.831 |
| delta_Rv3717 | -0.708 | -1.148 |
| delta_Rv3811 | -1.527 | -1.06 |
| delta_Rv0954 | 0.023 | 0.11 |
| PonA1 | 0.403 | -0.184 |
| EccD1_KO | -0.691 | -0.921 |
| EspI_KO | 0.257 | -1.631 |
| PE35_KO | -1.639 | -1.657 |
| PPE68_KO | 0.288 | -1.053 |
| glycerol2 | -0.619 | 0.301 |
| lignocerate | -2.662 | -2.999 |
| oleate | -1.266 | -0.777 |
| phosphatidylcholine | -2.311 | -1.41 |
| acetate | -0.845 | -0.088 |
| glucAc | -0.392 | -0.337 |
| Rv0950ko | 1.556 | 0.479 |
| Rv1096ko | 0.863 | 0.621 |
| Rv3684ko | 1.389 | 1.012 |
| delta_otsA_trehalose | -0.038 | -1.207 |