Top 10 genes with highest correlation to Rv3617/ephA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0338c/- | (cc=0.4594) | info on Rv0338c/- |
| Rv0433/- | (cc=0.4583) | info on Rv0433/- |
| Rv0196/- | (cc=0.4392) | info on Rv0196/- |
| Rv3618/- | (cc=0.4377) | info on Rv3618/- |
| Rv1181/pks4 | (cc=0.4361) | info on Rv1181/pks4 |
| Rv2095c/pafC | (cc=0.4348) | info on Rv2095c/pafC |
| Rv2636/- | (cc=0.4295) | info on Rv2636/- |
| Rv3276c/purK | (cc=0.428) | info on Rv3276c/purK |
| Rv0263c/- | (cc=0.428) | info on Rv0263c/- |
| Rv0942/- | (cc=0.4278) | info on Rv0942/- |
Correlation of Rv3617/ephA with Rv2636/-
Normalized LFCs for Rv3617/ephA:
(description and provenance of datasets)
| Rv3617/ephA | Rv2636/- | |
| Fe_supp_jason_reseq | 0.096 | -0.073 |
| low_pH_jason_reseq | 0.614 | -0.942 |
| NO_jason_reseq | -0.265 | 0.071 |
| B6_jason_reseq | 0.315 | 1.243 |
| MHCII_jason_reseq | 1.159 | 1.783 |
| Isoniazid02 | 0.685 | -0.55 |
| Rifampicin4 | -0.057 | 0.162 |
| Ethambutol3 | 0.535 | 0.417 |
| Meropenem3 | -1.017 | -1.06 |
| Vancomycin16 | -0.814 | -0.642 |
| Rv2680_day32 | -0.319 | 1.092 |
| H37Rv_KO_MarP | -0.216 | 0.013 |
| hypoxia_3wks | -0.698 | 0.056 |
| hypoxia_6wks | -0.505 | -0.186 |
| glycerol | 0.578 | 0.263 |
| cholesterol | 2.126 | 0.048 |
| AJ | 0.371 | 0.345 |
| Bibs02 | -0.044 | 0.177 |
| Bibs02c | -0.944 | 0.358 |
| BL6 | 0.125 | -0.987 |
| BL6a | -0.894 | -0.442 |
| BXD01 | -0.415 | -1.222 |
| BXD010 | -0.572 | -0.989 |
| BXD011 | -0.412 | -1.507 |
| BXD03 | 0.072 | -1.037 |
| BXD04 | -0.546 | -1.588 |
| BXD05 | -0.06 | -0.968 |
| BXD06 | -0.535 | -1.495 |
| BXD07 | -0.596 | -1.077 |
| BXD08 | -0.257 | -0.781 |
| BXD09 | -0.627 | -1.87 |
| CAST | 0.622 | 0.174 |
| CCcont | -0.883 | -1.767 |
| DS01 | -0.409 | 0.399 |
| DS02 | 0.484 | 0.578 |
| DS04 | -0.947 | -0.409 |
| DS0c | -0.492 | 0.083 |
| GP01 | -0.136 | -0.456 |
| GP02 | -0.411 | -0.744 |
| GP0c | -0.333 | -0.677 |
| NOD | 1.046 | 0.574 |
| NZO | -0.048 | 0.126 |
| PWK | 0.51 | -0.057 |
| H37Rv_KO_CtpC | -0.488 | -1.77 |
| H37Rv_KO_CtpD | 0.514 | -0.581 |
| H37Rv_KO_Rv1272 | -0.578 | -1.089 |
| H37Rv_KO_SugABC | 0.564 | -1.719 |
| H37Rv_KO_MbtN | -0.154 | -0.848 |
| Trans05 | 0.287 | -0.088 |
| macrophage_unactivated | -0.461 | -0.653 |
| IL1 | -0.409 | -0.445 |
| Rapamycin | -0.546 | -0.546 |
| Tcell | 0.0 | -0.867 |
| GMCSF | -0.077 | -0.446 |
| IFNab | -0.296 | -1.155 |
| IFNg | 0.19 | -0.136 |
| IFNg_GMCSF1 | 0.396 | -0.079 |
| Rv1432_day32 | 0.102 | -0.16 |
| Rv1565c_day32 | 0.613 | 0.062 |
| secA2_input | 0.587 | 1.133 |
| delta_Rv3594 | -0.239 | -0.601 |
| delta_Rv3717 | 0.125 | -0.271 |
| delta_Rv3811 | 0.183 | -0.458 |
| delta_Rv0954 | -0.315 | 0.151 |
| PonA1 | -0.045 | -0.324 |
| EccD1_KO | 0.016 | -0.151 |
| EspI_KO | -0.086 | 0.271 |
| PE35_KO | 0.058 | -0.079 |
| PPE68_KO | 0.157 | -0.266 |
| glycerol2 | 0.977 | 0.534 |
| lignocerate | 0.558 | 0.498 |
| oleate | -0.422 | 0.303 |
| phosphatidylcholine | 0.471 | 0.709 |
| acetate | 0.071 | 0.156 |
| glucAc | -0.337 | 0.155 |
| Rv0950ko | -0.036 | -0.027 |
| Rv1096ko | 0.344 | -0.25 |
| Rv3684ko | 1.251 | -0.662 |
| delta_otsA_trehalose | 0.257 | 0.719 |