Top 10 genes with highest correlation to Rv3612c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0470A/- | (cc=0.6512) | info on Rv0470A/- |
| Rv2681/- | (cc=0.6217) | info on Rv2681/- |
| Rv0071/- | (cc=0.6207) | info on Rv0071/- |
| Rv2636/- | (cc=0.6031) | info on Rv2636/- |
| Rv1323/fadA4 | (cc=0.6029) | info on Rv1323/fadA4 |
| Rv3641c/fic | (cc=0.5946) | info on Rv3641c/fic |
| Rv3590c/PE_PGRS58 | (cc=0.5689) | info on Rv3590c/PE_PGRS58 |
| Rv0840c/pip | (cc=0.5581) | info on Rv0840c/pip |
| Rv3354/- | (cc=0.5541) | info on Rv3354/- |
| Rv3480c/- | (cc=0.5537) | info on Rv3480c/- |
Correlation of Rv3612c/- with Rv2681/-
Normalized LFCs for Rv3612c/-:
(description and provenance of datasets)
| Rv3612c/- | Rv2681/- | |
| Fe_supp_jason_reseq | -0.314 | 1.628 |
| low_pH_jason_reseq | -0.333 | 0.102 |
| NO_jason_reseq | 0.228 | -1.494 |
| B6_jason_reseq | 0.354 | -1.794 |
| MHCII_jason_reseq | 1.809 | 0.06 |
| Isoniazid02 | 1.394 | 1.116 |
| Rifampicin4 | 1.191 | 0.0 |
| Ethambutol3 | 0.069 | -0.528 |
| Meropenem3 | 0.232 | 0.074 |
| Vancomycin16 | 0.297 | -1.804 |
| Rv2680_day32 | 1.278 | -0.971 |
| H37Rv_KO_MarP | -0.065 | 1.769 |
| hypoxia_3wks | -2.512 | -0.969 |
| hypoxia_6wks | -1.643 | -1.355 |
| glycerol | 0.967 | 1.17 |
| cholesterol | -0.227 | -0.141 |
| AJ | 0.692 | -0.901 |
| Bibs02 | 0.628 | -0.624 |
| Bibs02c | 0.887 | -0.873 |
| BL6 | -1.024 | -2.702 |
| BL6a | -0.92 | -1.543 |
| BXD01 | -1.386 | -3.117 |
| BXD010 | -3.698 | -3.065 |
| BXD011 | -1.393 | -2.752 |
| BXD03 | -2.598 | -2.921 |
| BXD04 | -2.528 | -2.49 |
| BXD05 | -2.116 | -2.979 |
| BXD06 | -2.302 | -3.285 |
| BXD07 | -2.05 | -3.407 |
| BXD08 | -2.123 | -3.273 |
| BXD09 | -1.894 | -3.274 |
| CAST | -0.143 | -0.125 |
| CCcont | -1.971 | -1.248 |
| DS01 | 0.186 | 0.713 |
| DS02 | 0.156 | 1.419 |
| DS04 | 0.218 | 0.914 |
| DS0c | 0.192 | 0.369 |
| GP01 | -3.03 | -2.66 |
| GP02 | -3.04 | -2.4 |
| GP0c | -2.059 | -3.503 |
| NOD | -0.192 | -0.029 |
| NZO | 0.897 | -1.342 |
| PWK | 0.041 | 0.473 |
| H37Rv_KO_CtpC | -1.396 | -1.589 |
| H37Rv_KO_CtpD | -0.149 | -0.579 |
| H37Rv_KO_Rv1272 | -0.978 | -2.354 |
| H37Rv_KO_SugABC | -1.643 | -1.995 |
| H37Rv_KO_MbtN | -1.882 | -2.226 |
| Trans05 | -2.219 | -2.413 |
| macrophage_unactivated | 0.079 | -2.702 |
| IL1 | -0.602 | -3.197 |
| Rapamycin | -2.348 | -2.627 |
| Tcell | -0.789 | -2.789 |
| GMCSF | -0.087 | -3.063 |
| IFNab | -1.539 | -3.773 |
| IFNg | -1.62 | -3.1 |
| IFNg_GMCSF1 | -0.239 | -2.275 |
| Rv1432_day32 | -1.109 | -2.117 |
| Rv1565c_day32 | 1.218 | 0.625 |
| secA2_input | -0.88 | 0.518 |
| delta_Rv3594 | -0.953 | -2.518 |
| delta_Rv3717 | -0.578 | -3.253 |
| delta_Rv3811 | -2.119 | -2.858 |
| delta_Rv0954 | -1.16 | -0.079 |
| PonA1 | -0.472 | 0.705 |
| EccD1_KO | -2.171 | -0.066 |
| EspI_KO | -0.704 | 0.217 |
| PE35_KO | 0.359 | 0.432 |
| PPE68_KO | 0.323 | -0.39 |
| glycerol2 | 0.748 | 0.863 |
| lignocerate | -0.377 | -0.242 |
| oleate | -0.011 | -0.846 |
| phosphatidylcholine | 0.077 | 0.731 |
| acetate | -0.372 | 0.15 |
| glucAc | -0.977 | 1.115 |
| Rv0950ko | 0.084 | -0.482 |
| Rv1096ko | 0.446 | -0.57 |
| Rv3684ko | -1.038 | -0.91 |
| delta_otsA_trehalose | -0.057 | 1.041 |