Top 10 genes with highest correlation to Rv3562/fadE31:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2175c/- | (cc=0.4979) | info on Rv2175c/- |
| Rv3100c/smpB | (cc=0.4961) | info on Rv3100c/smpB |
| Rv3591c/- | (cc=0.4841) | info on Rv3591c/- |
| Rv3560c/fadE30 | (cc=0.4833) | info on Rv3560c/fadE30 |
| Rv3534c/hsaF | (cc=0.478) | info on Rv3534c/hsaF |
| Rv3319/sdhB | (cc=0.4773) | info on Rv3319/sdhB |
| Rv0010c/- | (cc=0.4711) | info on Rv0010c/- |
| Rv2574/- | (cc=0.4463) | info on Rv2574/- |
| Rv1174c/TB8.4 | (cc=0.4402) | info on Rv1174c/TB8.4 |
| Rv1283c/oppB | (cc=0.44) | info on Rv1283c/oppB |
Correlation of Rv3562/fadE31 with Rv2574/-
Normalized LFCs for Rv3562/fadE31:
(description and provenance of datasets)
| Rv3562/fadE31 | Rv2574/- | |
| Fe_supp_jason_reseq | 1.904 | 0.104 |
| low_pH_jason_reseq | 0.345 | -0.308 |
| NO_jason_reseq | 1.436 | 0.428 |
| B6_jason_reseq | 0.52 | 0.083 |
| MHCII_jason_reseq | 0.201 | 0.559 |
| Isoniazid02 | 0.127 | 0.166 |
| Rifampicin4 | 0.119 | -0.06 |
| Ethambutol3 | -0.433 | -0.242 |
| Meropenem3 | -0.648 | 0.479 |
| Vancomycin16 | -0.247 | 0.34 |
| Rv2680_day32 | 0.0 | -0.08 |
| H37Rv_KO_MarP | 0.559 | -0.016 |
| hypoxia_3wks | 0.287 | 1.085 |
| hypoxia_6wks | -0.691 | -0.209 |
| glycerol | 0.161 | -1.044 |
| cholesterol | -2.021 | -0.646 |
| AJ | -1.556 | -0.6 |
| Bibs02 | 0.446 | 0.947 |
| Bibs02c | -0.915 | -0.424 |
| BL6 | -0.776 | -0.558 |
| BL6a | -0.951 | 0.086 |
| BXD01 | -0.322 | -0.154 |
| BXD010 | 0.543 | 0.555 |
| BXD011 | -1.237 | -0.591 |
| BXD03 | -1.751 | 0.0 |
| BXD04 | -0.896 | 0.567 |
| BXD05 | -0.481 | 0.196 |
| BXD06 | -1.122 | -0.076 |
| BXD07 | -0.859 | -0.121 |
| BXD08 | -0.698 | -0.068 |
| BXD09 | -0.802 | 0.238 |
| CAST | -1.799 | -0.065 |
| CCcont | -0.653 | -0.692 |
| DS01 | -0.274 | -0.544 |
| DS02 | 1.289 | 0.481 |
| DS04 | -2.174 | -0.433 |
| DS0c | -0.613 | -0.41 |
| GP01 | -1.378 | 0.275 |
| GP02 | -1.161 | 0.621 |
| GP0c | -1.566 | -0.178 |
| NOD | -0.983 | -0.41 |
| NZO | -1.338 | -0.15 |
| PWK | -1.905 | -0.232 |
| H37Rv_KO_CtpC | -1.696 | 0.26 |
| H37Rv_KO_CtpD | -1.322 | -0.08 |
| H37Rv_KO_Rv1272 | -0.3 | 0.508 |
| H37Rv_KO_SugABC | -1.193 | -1.894 |
| H37Rv_KO_MbtN | -1.335 | 0.411 |
| Trans05 | -1.098 | -0.712 |
| macrophage_unactivated | 0.0 | 0.571 |
| IL1 | -0.451 | 0.733 |
| Rapamycin | 1.046 | 1.488 |
| Tcell | 0.0 | 0.56 |
| GMCSF | 0.478 | 0.478 |
| IFNab | 1.146 | 0.417 |
| IFNg | -0.861 | 0.81 |
| IFNg_GMCSF1 | 1.191 | 0.349 |
| Rv1432_day32 | 0.0 | 0.567 |
| Rv1565c_day32 | -0.325 | 0.19 |
| secA2_input | 0.88 | 1.108 |
| delta_Rv3594 | -1.833 | -0.139 |
| delta_Rv3717 | -0.668 | 0.264 |
| delta_Rv3811 | -0.171 | 0.422 |
| delta_Rv0954 | -0.149 | 1.022 |
| PonA1 | -0.133 | 0.029 |
| EccD1_KO | 0.891 | 0.569 |
| EspI_KO | 0.274 | 1.192 |
| PE35_KO | -0.974 | 1.388 |
| PPE68_KO | -0.506 | 0.285 |
| glycerol2 | -0.297 | 0.231 |
| lignocerate | -1.299 | -0.149 |
| oleate | 0.179 | 0.686 |
| phosphatidylcholine | -0.406 | 0.392 |
| acetate | -0.999 | -0.326 |
| glucAc | -1.508 | -0.337 |
| Rv0950ko | 0.154 | 0.63 |
| Rv1096ko | 0.443 | 0.657 |
| Rv3684ko | -0.17 | 0.337 |
| delta_otsA_trehalose | -0.564 | 0.967 |