Top 10 genes with highest correlation to Rv3562/fadE31:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2175c/- | (cc=0.4979) | info on Rv2175c/- |
| Rv3100c/smpB | (cc=0.4961) | info on Rv3100c/smpB |
| Rv3591c/- | (cc=0.4841) | info on Rv3591c/- |
| Rv3560c/fadE30 | (cc=0.4833) | info on Rv3560c/fadE30 |
| Rv3534c/hsaF | (cc=0.478) | info on Rv3534c/hsaF |
| Rv3319/sdhB | (cc=0.4773) | info on Rv3319/sdhB |
| Rv0010c/- | (cc=0.4711) | info on Rv0010c/- |
| Rv2574/- | (cc=0.4463) | info on Rv2574/- |
| Rv1174c/TB8.4 | (cc=0.4402) | info on Rv1174c/TB8.4 |
| Rv1283c/oppB | (cc=0.44) | info on Rv1283c/oppB |
Correlation of Rv3562/fadE31 with Rv1174c/TB8.4
Normalized LFCs for Rv3562/fadE31:
(description and provenance of datasets)
| Rv3562/fadE31 | Rv1174c/TB8.4 | |
| Fe_supp_jason_reseq | 1.904 | 1.006 |
| low_pH_jason_reseq | 0.345 | -1.074 |
| NO_jason_reseq | 1.436 | -0.659 |
| B6_jason_reseq | 0.52 | -1.19 |
| MHCII_jason_reseq | 0.201 | -1.116 |
| Isoniazid02 | 0.127 | 0.474 |
| Rifampicin4 | 0.119 | -2.117 |
| Ethambutol3 | -0.433 | -0.251 |
| Meropenem3 | -0.648 | -0.256 |
| Vancomycin16 | -0.247 | -0.557 |
| Rv2680_day32 | 0.0 | -3.066 |
| H37Rv_KO_MarP | 0.559 | 0.477 |
| hypoxia_3wks | 0.287 | 5.068 |
| hypoxia_6wks | -0.691 | 1.539 |
| glycerol | 0.161 | 0.746 |
| cholesterol | -2.021 | -0.354 |
| AJ | -1.556 | -1.479 |
| Bibs02 | 0.446 | 0.076 |
| Bibs02c | -0.915 | -0.84 |
| BL6 | -0.776 | -1.805 |
| BL6a | -0.951 | -1.113 |
| BXD01 | -0.322 | -2.645 |
| BXD010 | 0.543 | -1.507 |
| BXD011 | -1.237 | -1.303 |
| BXD03 | -1.751 | -1.511 |
| BXD04 | -0.896 | -1.871 |
| BXD05 | -0.481 | -1.719 |
| BXD06 | -1.122 | -2.136 |
| BXD07 | -0.859 | -1.768 |
| BXD08 | -0.698 | -1.725 |
| BXD09 | -0.802 | -2.16 |
| CAST | -1.799 | -2.898 |
| CCcont | -0.653 | -0.587 |
| DS01 | -0.274 | -1.305 |
| DS02 | 1.289 | -0.424 |
| DS04 | -2.174 | -2.351 |
| DS0c | -0.613 | -0.889 |
| GP01 | -1.378 | -2.627 |
| GP02 | -1.161 | -2.629 |
| GP0c | -1.566 | -2.048 |
| NOD | -0.983 | -1.577 |
| NZO | -1.338 | -1.734 |
| PWK | -1.905 | -2.431 |
| H37Rv_KO_CtpC | -1.696 | -0.994 |
| H37Rv_KO_CtpD | -1.322 | 1.407 |
| H37Rv_KO_Rv1272 | -0.3 | -1.005 |
| H37Rv_KO_SugABC | -1.193 | -1.452 |
| H37Rv_KO_MbtN | -1.335 | -1.268 |
| Trans05 | -1.098 | -1.288 |
| macrophage_unactivated | 0.0 | 0.54 |
| IL1 | -0.451 | -0.486 |
| Rapamycin | 1.046 | 0.697 |
| Tcell | 0.0 | 0.557 |
| GMCSF | 0.478 | 1.756 |
| IFNab | 1.146 | 0.671 |
| IFNg | -0.861 | 0.521 |
| IFNg_GMCSF1 | 1.191 | 0.245 |
| Rv1432_day32 | 0.0 | -2.86 |
| Rv1565c_day32 | -0.325 | -0.093 |
| secA2_input | 0.88 | 0.315 |
| delta_Rv3594 | -1.833 | -0.932 |
| delta_Rv3717 | -0.668 | -1.375 |
| delta_Rv3811 | -0.171 | -0.741 |
| delta_Rv0954 | -0.149 | 0.309 |
| PonA1 | -0.133 | -0.463 |
| EccD1_KO | 0.891 | 0.993 |
| EspI_KO | 0.274 | 0.739 |
| PE35_KO | -0.974 | 0.872 |
| PPE68_KO | -0.506 | 1.062 |
| glycerol2 | -0.297 | 0.632 |
| lignocerate | -1.299 | -0.356 |
| oleate | 0.179 | 0.292 |
| phosphatidylcholine | -0.406 | 0.924 |
| acetate | -0.999 | -0.14 |
| glucAc | -1.508 | -0.157 |
| Rv0950ko | 0.154 | 0.718 |
| Rv1096ko | 0.443 | 0.265 |
| Rv3684ko | -0.17 | -0.481 |
| delta_otsA_trehalose | -0.564 | -0.328 |