Top 10 genes with highest correlation to Rv3539/PPE63:
update plot | correlation | link to info on gene |
---|---|---|
Rv3713/cobQ2 | (cc=0.5056) | info on Rv3713/cobQ2 |
Rv0552/- | (cc=0.4871) | info on Rv0552/- |
Rv0273c/- | (cc=0.4803) | info on Rv0273c/- |
Rv0687/- | (cc=0.4759) | info on Rv0687/- |
Rv2164c/- | (cc=0.4629) | info on Rv2164c/- |
Rv2678c/hemE | (cc=0.4562) | info on Rv2678c/hemE |
Rv0144/- | (cc=0.4502) | info on Rv0144/- |
Rv0701/rplC | (cc=0.4445) | info on Rv0701/rplC |
Rv1339/- | (cc=0.4403) | info on Rv1339/- |
Rv1191/- | (cc=0.4401) | info on Rv1191/- |
Correlation of Rv3539/PPE63 with Rv0687/-
Normalized LFCs for Rv3539/PPE63:
(description and provenance of datasets)
Rv3539/PPE63 | Rv0687/- | |
Fe_supp_jason_reseq | -0.025 | -1.187 |
low_pH_jason_reseq | 0.867 | 0.805 |
NO_jason_reseq | 0.407 | 0.412 |
B6_jason_reseq | -0.193 | -0.312 |
MHCII_jason_reseq | -0.049 | -0.311 |
Isoniazid02 | 0.07 | 1.116 |
Rifampicin4 | 0.612 | 1.083 |
Ethambutol3 | -0.255 | 1.198 |
Meropenem3 | 2.53 | 3.163 |
Vancomycin16 | 0.544 | 1.061 |
Rv2680_day32 | -0.683 | -0.637 |
H37Rv_KO_MarP | 0.337 | -0.189 |
hypoxia_3wks | 0.347 | -0.311 |
hypoxia_6wks | 0.986 | 0.867 |
glycerol | -0.225 | -0.764 |
cholesterol | -0.162 | -0.391 |
AJ | 0.395 | 0.316 |
Bibs02 | 1.08 | -0.624 |
Bibs02c | 0.471 | -1.381 |
BL6 | -0.338 | -0.89 |
BL6a | 0.247 | -1.075 |
BXD01 | 0.348 | -0.518 |
BXD010 | -0.07 | -1.907 |
BXD011 | 0.545 | -1.009 |
BXD03 | -0.389 | -1.15 |
BXD04 | 0.529 | -1.209 |
BXD05 | 0.516 | -1.271 |
BXD06 | -0.13 | -1.261 |
BXD07 | -0.018 | -0.847 |
BXD08 | 0.052 | -0.091 |
BXD09 | 0.108 | -1.374 |
CAST | 0.177 | 0.177 |
CCcont | -0.188 | -0.403 |
DS01 | -0.481 | -0.298 |
DS02 | -0.058 | -0.443 |
DS04 | -0.188 | 0.538 |
DS0c | 0.218 | 0.167 |
GP01 | 0.423 | 0.0 |
GP02 | 1.274 | -1.195 |
GP0c | 0.728 | 0.677 |
NOD | 0.254 | -1.219 |
NZO | 0.906 | 0.201 |
PWK | 0.173 | -0.026 |
H37Rv_KO_CtpC | 0.467 | 0.164 |
H37Rv_KO_CtpD | 0.629 | 0.942 |
H37Rv_KO_Rv1272 | 1.146 | -0.221 |
H37Rv_KO_SugABC | 0.858 | -0.583 |
H37Rv_KO_MbtN | 0.494 | 0.164 |
Trans05 | 0.782 | 0.513 |
macrophage_unactivated | -0.211 | -1.61 |
IL1 | -0.409 | -1.385 |
Rapamycin | 0.132 | -1.841 |
Tcell | -0.143 | -1.522 |
GMCSF | -0.301 | -0.082 |
IFNab | 0.067 | -1.542 |
IFNg | -0.633 | -1.136 |
IFNg_GMCSF1 | 0.201 | 0.371 |
Rv1432_day32 | 0.026 | -0.661 |
Rv1565c_day32 | 1.005 | 1.469 |
secA2_input | 0.661 | 0.967 |
delta_Rv3594 | 0.684 | 1.744 |
delta_Rv3717 | 1.031 | 1.085 |
delta_Rv3811 | 0.805 | 1.558 |
delta_Rv0954 | 0.0 | 0.238 |
PonA1 | 0.744 | 0.974 |
EccD1_KO | -0.997 | -0.187 |
EspI_KO | -0.642 | -0.625 |
PE35_KO | -0.977 | -0.455 |
PPE68_KO | -1.177 | -0.499 |
glycerol2 | -0.092 | 0.635 |
lignocerate | 0.188 | 0.061 |
oleate | 0.197 | 0.912 |
phosphatidylcholine | 0.132 | 0.326 |
acetate | -0.791 | -0.266 |
glucAc | -0.068 | 0.026 |
Rv0950ko | 0.0 | -0.241 |
Rv1096ko | 0.368 | -0.564 |
Rv3684ko | 0.0 | -1.15 |
delta_otsA_trehalose | -0.075 | 0.333 |