Top 10 genes with highest correlation to Rv3537/kstD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3545c/cyp125 | (cc=0.6247) | info on Rv3545c/cyp125 |
| Rv1337/- | (cc=0.5883) | info on Rv1337/- |
| Rv3542c/- | (cc=0.564) | info on Rv3542c/- |
| Rv3036c/TB22.2 | (cc=0.5539) | info on Rv3036c/TB22.2 |
| Rv1417/- | (cc=0.553) | info on Rv1417/- |
| Rv3900c/- | (cc=0.5508) | info on Rv3900c/- |
| Rv3866/espG1 | (cc=0.5269) | info on Rv3866/espG1 |
| Rv3867/espH | (cc=0.5262) | info on Rv3867/espH |
| Rv1131/prpC | (cc=0.5207) | info on Rv1131/prpC |
| Rv3502c/- | (cc=0.5203) | info on Rv3502c/- |
Correlation of Rv3537/kstD with Rv3502c/-
Normalized LFCs for Rv3537/kstD:
(description and provenance of datasets)
| Rv3537/kstD | Rv3502c/- | |
| Fe_supp_jason_reseq | -1.077 | -0.336 |
| low_pH_jason_reseq | 0.821 | -1.28 |
| NO_jason_reseq | -0.344 | -0.016 |
| B6_jason_reseq | -2.065 | -3.524 |
| MHCII_jason_reseq | -1.746 | -3.922 |
| Isoniazid02 | -0.044 | -2.007 |
| Rifampicin4 | -0.341 | 0.669 |
| Ethambutol3 | -0.276 | -1.852 |
| Meropenem3 | -0.073 | -1.668 |
| Vancomycin16 | 0.52 | -0.525 |
| Rv2680_day32 | -1.619 | -2.581 |
| H37Rv_KO_MarP | 0.741 | 0.508 |
| hypoxia_3wks | 0.108 | -0.714 |
| hypoxia_6wks | 0.223 | -0.687 |
| glycerol | -0.215 | 0.69 |
| cholesterol | -1.569 | -3.872 |
| AJ | -1.318 | -4.212 |
| Bibs02 | -0.935 | -4.722 |
| Bibs02c | -1.314 | -5.065 |
| BL6 | 0.625 | -2.7 |
| BL6a | -0.445 | -4.653 |
| BXD01 | 0.347 | -2.668 |
| BXD010 | 0.307 | -3.551 |
| BXD011 | 0.436 | -0.815 |
| BXD03 | 0.861 | -1.315 |
| BXD04 | -0.566 | -1.429 |
| BXD05 | 0.249 | -2.501 |
| BXD06 | -0.246 | -2.961 |
| BXD07 | 0.176 | -3.253 |
| BXD08 | -0.092 | -1.451 |
| BXD09 | 0.047 | -3.117 |
| CAST | -0.616 | -3.824 |
| CCcont | 0.398 | -0.174 |
| DS01 | -1.632 | -4.965 |
| DS02 | -0.679 | -3.316 |
| DS04 | -0.519 | -3.781 |
| DS0c | -1.645 | -5.251 |
| GP01 | 0.81 | -1.835 |
| GP02 | -0.426 | -1.846 |
| GP0c | 1.507 | -0.039 |
| NOD | -1.149 | -2.804 |
| NZO | -0.812 | -2.861 |
| PWK | -0.703 | -3.645 |
| H37Rv_KO_CtpC | -0.113 | -3.507 |
| H37Rv_KO_CtpD | -0.088 | -2.53 |
| H37Rv_KO_Rv1272 | -0.098 | -2.502 |
| H37Rv_KO_SugABC | 1.302 | 0.205 |
| H37Rv_KO_MbtN | 0.536 | -1.675 |
| Trans05 | 0.313 | -2.747 |
| macrophage_unactivated | 0.549 | 0.407 |
| IL1 | 0.0 | -0.483 |
| Rapamycin | -0.114 | -0.844 |
| Tcell | -0.375 | -2.955 |
| GMCSF | 0.628 | 0.1 |
| IFNab | 0.813 | 1.787 |
| IFNg | 0.879 | 0.526 |
| IFNg_GMCSF1 | 0.943 | 0.349 |
| Rv1432_day32 | -0.232 | -1.936 |
| Rv1565c_day32 | -1.529 | -5.231 |
| secA2_input | -0.474 | -0.125 |
| delta_Rv3594 | -0.167 | 0.104 |
| delta_Rv3717 | -0.325 | 0.113 |
| delta_Rv3811 | 0.257 | 0.291 |
| delta_Rv0954 | 0.423 | 0.253 |
| PonA1 | -0.159 | -0.246 |
| EccD1_KO | -1.184 | -0.585 |
| EspI_KO | -1.435 | -0.376 |
| PE35_KO | -0.817 | -1.018 |
| PPE68_KO | -0.138 | -0.886 |
| glycerol2 | -0.161 | -0.593 |
| lignocerate | -0.52 | 0.084 |
| oleate | 0.269 | -1.195 |
| phosphatidylcholine | -0.161 | -0.683 |
| acetate | -0.512 | -0.652 |
| glucAc | -0.959 | 0.216 |
| Rv0950ko | -0.374 | 0.09 |
| Rv1096ko | -0.244 | 0.03 |
| Rv3684ko | 0.19 | 0.098 |
| delta_otsA_trehalose | -0.858 | -0.09 |