Top 10 genes with highest correlation to Rv3537/kstD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3545c/cyp125 | (cc=0.6247) | info on Rv3545c/cyp125 |
| Rv1337/- | (cc=0.5883) | info on Rv1337/- |
| Rv3542c/- | (cc=0.564) | info on Rv3542c/- |
| Rv3036c/TB22.2 | (cc=0.5539) | info on Rv3036c/TB22.2 |
| Rv1417/- | (cc=0.553) | info on Rv1417/- |
| Rv3900c/- | (cc=0.5508) | info on Rv3900c/- |
| Rv3866/espG1 | (cc=0.5269) | info on Rv3866/espG1 |
| Rv3867/espH | (cc=0.5262) | info on Rv3867/espH |
| Rv1131/prpC | (cc=0.5207) | info on Rv1131/prpC |
| Rv3502c/- | (cc=0.5203) | info on Rv3502c/- |
Correlation of Rv3537/kstD with Rv3545c/cyp125
Normalized LFCs for Rv3537/kstD:
(description and provenance of datasets)
| Rv3537/kstD | Rv3545c/cyp125 | |
| Fe_supp_jason_reseq | -1.077 | -0.39 |
| low_pH_jason_reseq | 0.821 | 0.378 |
| NO_jason_reseq | -0.344 | 0.068 |
| B6_jason_reseq | -2.065 | -1.491 |
| MHCII_jason_reseq | -1.746 | -1.426 |
| Isoniazid02 | -0.044 | 0.122 |
| Rifampicin4 | -0.341 | -0.877 |
| Ethambutol3 | -0.276 | 0.496 |
| Meropenem3 | -0.073 | 0.821 |
| Vancomycin16 | 0.52 | -0.342 |
| Rv2680_day32 | -1.619 | -1.752 |
| H37Rv_KO_MarP | 0.741 | -0.162 |
| hypoxia_3wks | 0.108 | 0.159 |
| hypoxia_6wks | 0.223 | 0.117 |
| glycerol | -0.215 | 0.064 |
| cholesterol | -1.569 | -2.313 |
| AJ | -1.318 | -2.397 |
| Bibs02 | -0.935 | -2.191 |
| Bibs02c | -1.314 | -2.402 |
| BL6 | 0.625 | -0.307 |
| BL6a | -0.445 | -1.235 |
| BXD01 | 0.347 | 0.042 |
| BXD010 | 0.307 | -0.25 |
| BXD011 | 0.436 | -0.141 |
| BXD03 | 0.861 | 0.268 |
| BXD04 | -0.566 | 0.303 |
| BXD05 | 0.249 | -0.46 |
| BXD06 | -0.246 | -0.534 |
| BXD07 | 0.176 | 0.266 |
| BXD08 | -0.092 | 0.228 |
| BXD09 | 0.047 | -0.512 |
| CAST | -0.616 | -1.842 |
| CCcont | 0.398 | 0.929 |
| DS01 | -1.632 | -2.89 |
| DS02 | -0.679 | -2.777 |
| DS04 | -0.519 | -1.587 |
| DS0c | -1.645 | -3.306 |
| GP01 | 0.81 | -0.327 |
| GP02 | -0.426 | -1.063 |
| GP0c | 1.507 | -0.332 |
| NOD | -1.149 | -0.718 |
| NZO | -0.812 | -2.494 |
| PWK | -0.703 | -1.195 |
| H37Rv_KO_CtpC | -0.113 | -0.108 |
| H37Rv_KO_CtpD | -0.088 | -1.845 |
| H37Rv_KO_Rv1272 | -0.098 | 0.309 |
| H37Rv_KO_SugABC | 1.302 | 1.105 |
| H37Rv_KO_MbtN | 0.536 | 0.525 |
| Trans05 | 0.313 | -0.652 |
| macrophage_unactivated | 0.549 | 0.552 |
| IL1 | 0.0 | 0.872 |
| Rapamycin | -0.114 | 0.844 |
| Tcell | -0.375 | -0.782 |
| GMCSF | 0.628 | 0.09 |
| IFNab | 0.813 | 1.14 |
| IFNg | 0.879 | 0.412 |
| IFNg_GMCSF1 | 0.943 | -0.038 |
| Rv1432_day32 | -0.232 | -2.369 |
| Rv1565c_day32 | -1.529 | -1.392 |
| secA2_input | -0.474 | 0.393 |
| delta_Rv3594 | -0.167 | 0.454 |
| delta_Rv3717 | -0.325 | 0.215 |
| delta_Rv3811 | 0.257 | 0.162 |
| delta_Rv0954 | 0.423 | 0.702 |
| PonA1 | -0.159 | 0.599 |
| EccD1_KO | -1.184 | -0.457 |
| EspI_KO | -1.435 | -0.451 |
| PE35_KO | -0.817 | -0.198 |
| PPE68_KO | -0.138 | -0.246 |
| glycerol2 | -0.161 | 0.601 |
| lignocerate | -0.52 | 0.705 |
| oleate | 0.269 | 0.272 |
| phosphatidylcholine | -0.161 | 0.541 |
| acetate | -0.512 | 0.436 |
| glucAc | -0.959 | 0.284 |
| Rv0950ko | -0.374 | 0.0 |
| Rv1096ko | -0.244 | 0.202 |
| Rv3684ko | 0.19 | -0.075 |
| delta_otsA_trehalose | -0.858 | -0.675 |