Top 10 genes with highest correlation to Rv3509c/ilvX:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0578c/PE_PGRS7 | (cc=0.6284) | info on Rv0578c/PE_PGRS7 |
| Rv0218/- | (cc=0.5765) | info on Rv0218/- |
| Rv3624c/hpt | (cc=0.5668) | info on Rv3624c/hpt |
| Rv3344c/PE_PGRS49 | (cc=0.5628) | info on Rv3344c/PE_PGRS49 |
| Rv2841c/nusA | (cc=0.5514) | info on Rv2841c/nusA |
| Rv1135c/PPE16 | (cc=0.5487) | info on Rv1135c/PPE16 |
| Rv3607c/folB | (cc=0.5436) | info on Rv3607c/folB |
| Rv0835/lpqQ | (cc=0.5344) | info on Rv0835/lpqQ |
| Rv1734c/- | (cc=0.5338) | info on Rv1734c/- |
| Rv2571c/- | (cc=0.5323) | info on Rv2571c/- |
Correlation of Rv3509c/ilvX with Rv1734c/-
Normalized LFCs for Rv3509c/ilvX:
(description and provenance of datasets)
| Rv3509c/ilvX | Rv1734c/- | |
| Fe_supp_jason_reseq | -0.081 | -0.758 |
| low_pH_jason_reseq | -0.375 | -1.522 |
| NO_jason_reseq | -0.257 | 0.189 |
| B6_jason_reseq | 0.367 | 0.334 |
| MHCII_jason_reseq | 0.362 | 0.931 |
| Isoniazid02 | 1.147 | 0.07 |
| Rifampicin4 | 0.55 | -0.972 |
| Ethambutol3 | 0.899 | -0.362 |
| Meropenem3 | 0.328 | -0.186 |
| Vancomycin16 | 0.727 | -0.791 |
| Rv2680_day32 | -0.207 | 0.413 |
| H37Rv_KO_MarP | 0.302 | -0.143 |
| hypoxia_3wks | -0.104 | 0.052 |
| hypoxia_6wks | -0.355 | 0.629 |
| glycerol | 0.699 | -1.717 |
| cholesterol | 0.869 | -0.385 |
| AJ | 0.282 | -0.637 |
| Bibs02 | 0.34 | 0.18 |
| Bibs02c | 0.45 | -0.115 |
| BL6 | 0.502 | -5.025 |
| BL6a | 0.458 | -1.475 |
| BXD01 | 0.516 | -1.484 |
| BXD010 | 0.03 | -1.162 |
| BXD011 | 0.68 | -1.613 |
| BXD03 | 0.047 | -2.441 |
| BXD04 | 0.408 | -3.083 |
| BXD05 | -0.064 | -3.861 |
| BXD06 | 0.39 | -2.192 |
| BXD07 | 0.174 | -2.899 |
| BXD08 | -0.011 | -3.815 |
| BXD09 | 0.126 | -2.746 |
| CAST | 0.207 | -0.148 |
| CCcont | -0.281 | -3.255 |
| DS01 | 0.409 | 0.659 |
| DS02 | 0.28 | 0.408 |
| DS04 | 0.835 | 0.481 |
| DS0c | 0.594 | 0.424 |
| GP01 | -0.119 | -0.855 |
| GP02 | -0.02 | -1.086 |
| GP0c | -0.314 | -2.222 |
| NOD | 0.714 | -0.272 |
| NZO | -0.048 | -0.8 |
| PWK | 0.415 | 0.074 |
| H37Rv_KO_CtpC | -0.006 | -1.159 |
| H37Rv_KO_CtpD | 0.044 | -4.643 |
| H37Rv_KO_Rv1272 | 0.167 | -0.903 |
| H37Rv_KO_SugABC | 0.471 | 0.39 |
| H37Rv_KO_MbtN | 0.257 | -0.286 |
| Trans05 | 0.094 | -0.229 |
| macrophage_unactivated | -0.732 | -4.564 |
| IL1 | -0.602 | -6.0 |
| Rapamycin | -0.868 | -5.291 |
| Tcell | -0.459 | -2.727 |
| GMCSF | -0.428 | -4.668 |
| IFNab | -0.856 | -4.831 |
| IFNg | -0.877 | -6.0 |
| IFNg_GMCSF1 | 0.226 | -2.485 |
| Rv1432_day32 | 0.756 | 0.421 |
| Rv1565c_day32 | 0.175 | -0.199 |
| secA2_input | -0.189 | -5.268 |
| delta_Rv3594 | 0.783 | 2.268 |
| delta_Rv3717 | 0.039 | 1.881 |
| delta_Rv3811 | 0.651 | 2.17 |
| delta_Rv0954 | 0.915 | 1.354 |
| PonA1 | 0.743 | 2.964 |
| EccD1_KO | 0.072 | -0.664 |
| EspI_KO | -0.125 | -2.98 |
| PE35_KO | -0.064 | -1.19 |
| PPE68_KO | -0.384 | -1.699 |
| glycerol2 | -0.174 | -0.336 |
| lignocerate | -0.358 | -0.566 |
| oleate | -0.33 | 0.34 |
| phosphatidylcholine | -0.209 | -0.227 |
| acetate | -0.849 | -0.01 |
| glucAc | -0.171 | -1.467 |
| Rv0950ko | 0.612 | 0.519 |
| Rv1096ko | 0.953 | 0.642 |
| Rv3684ko | 0.4 | -0.115 |
| delta_otsA_trehalose | -0.209 | 0.443 |