Top 10 genes with highest correlation to Rv3509c/ilvX:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0578c/PE_PGRS7 | (cc=0.6284) | info on Rv0578c/PE_PGRS7 |
| Rv0218/- | (cc=0.5765) | info on Rv0218/- |
| Rv3624c/hpt | (cc=0.5668) | info on Rv3624c/hpt |
| Rv3344c/PE_PGRS49 | (cc=0.5628) | info on Rv3344c/PE_PGRS49 |
| Rv2841c/nusA | (cc=0.5514) | info on Rv2841c/nusA |
| Rv1135c/PPE16 | (cc=0.5487) | info on Rv1135c/PPE16 |
| Rv3607c/folB | (cc=0.5436) | info on Rv3607c/folB |
| Rv0835/lpqQ | (cc=0.5344) | info on Rv0835/lpqQ |
| Rv1734c/- | (cc=0.5338) | info on Rv1734c/- |
| Rv2571c/- | (cc=0.5323) | info on Rv2571c/- |
Correlation of Rv3509c/ilvX with Rv0578c/PE_PGRS7
Normalized LFCs for Rv3509c/ilvX:
(description and provenance of datasets)
| Rv3509c/ilvX | Rv0578c/PE_PGRS7 | |
| Fe_supp_jason_reseq | -0.081 | -2.133 |
| low_pH_jason_reseq | -0.375 | -0.806 |
| NO_jason_reseq | -0.257 | -0.99 |
| B6_jason_reseq | 0.367 | -0.628 |
| MHCII_jason_reseq | 0.362 | -0.418 |
| Isoniazid02 | 1.147 | -0.735 |
| Rifampicin4 | 0.55 | 0.42 |
| Ethambutol3 | 0.899 | 1.592 |
| Meropenem3 | 0.328 | 0.944 |
| Vancomycin16 | 0.727 | -0.271 |
| Rv2680_day32 | -0.207 | 0.172 |
| H37Rv_KO_MarP | 0.302 | 0.574 |
| hypoxia_3wks | -0.104 | -0.231 |
| hypoxia_6wks | -0.355 | -0.808 |
| glycerol | 0.699 | 0.238 |
| cholesterol | 0.869 | 0.276 |
| AJ | 0.282 | 0.983 |
| Bibs02 | 0.34 | 0.588 |
| Bibs02c | 0.45 | 0.828 |
| BL6 | 0.502 | -1.265 |
| BL6a | 0.458 | -0.739 |
| BXD01 | 0.516 | -0.89 |
| BXD010 | 0.03 | -0.64 |
| BXD011 | 0.68 | -0.87 |
| BXD03 | 0.047 | -0.464 |
| BXD04 | 0.408 | -0.796 |
| BXD05 | -0.064 | -0.386 |
| BXD06 | 0.39 | -1.211 |
| BXD07 | 0.174 | -0.788 |
| BXD08 | -0.011 | 0.107 |
| BXD09 | 0.126 | -0.702 |
| CAST | 0.207 | 0.095 |
| CCcont | -0.281 | -1.146 |
| DS01 | 0.409 | -0.101 |
| DS02 | 0.28 | 0.175 |
| DS04 | 0.835 | 0.624 |
| DS0c | 0.594 | -0.14 |
| GP01 | -0.119 | -0.31 |
| GP02 | -0.02 | -0.054 |
| GP0c | -0.314 | -0.113 |
| NOD | 0.714 | -0.583 |
| NZO | -0.048 | 0.0 |
| PWK | 0.415 | 0.269 |
| H37Rv_KO_CtpC | -0.006 | -0.511 |
| H37Rv_KO_CtpD | 0.044 | 0.606 |
| H37Rv_KO_Rv1272 | 0.167 | 0.141 |
| H37Rv_KO_SugABC | 0.471 | -0.37 |
| H37Rv_KO_MbtN | 0.257 | -0.481 |
| Trans05 | 0.094 | -0.056 |
| macrophage_unactivated | -0.732 | -1.891 |
| IL1 | -0.602 | -2.186 |
| Rapamycin | -0.868 | -2.569 |
| Tcell | -0.459 | -2.098 |
| GMCSF | -0.428 | -1.251 |
| IFNab | -0.856 | -2.851 |
| IFNg | -0.877 | -2.376 |
| IFNg_GMCSF1 | 0.226 | -1.882 |
| Rv1432_day32 | 0.756 | 1.064 |
| Rv1565c_day32 | 0.175 | -0.182 |
| secA2_input | -0.189 | 0.814 |
| delta_Rv3594 | 0.783 | 0.142 |
| delta_Rv3717 | 0.039 | -0.232 |
| delta_Rv3811 | 0.651 | -0.375 |
| delta_Rv0954 | 0.915 | -0.544 |
| PonA1 | 0.743 | -0.091 |
| EccD1_KO | 0.072 | -0.237 |
| EspI_KO | -0.125 | -0.536 |
| PE35_KO | -0.064 | -0.607 |
| PPE68_KO | -0.384 | -0.602 |
| glycerol2 | -0.174 | -1.852 |
| lignocerate | -0.358 | -2.21 |
| oleate | -0.33 | -1.528 |
| phosphatidylcholine | -0.209 | -1.852 |
| acetate | -0.849 | -2.135 |
| glucAc | -0.171 | -1.532 |
| Rv0950ko | 0.612 | -0.133 |
| Rv1096ko | 0.953 | 0.718 |
| Rv3684ko | 0.4 | 0.534 |
| delta_otsA_trehalose | -0.209 | -0.341 |