Top 10 genes with highest correlation to Rv3502c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3551/- | (cc=0.8591) | info on Rv3551/- |
| Rv3544c/fadE28 | (cc=0.8557) | info on Rv3544c/fadE28 |
| Rv3542c/- | (cc=0.8547) | info on Rv3542c/- |
| Rv0485/- | (cc=0.8275) | info on Rv0485/- |
| Rv1568/bioA | (cc=0.8221) | info on Rv1568/bioA |
| Rv3556c/fadA6 | (cc=0.8119) | info on Rv3556c/fadA6 |
| Rv1589/bioB | (cc=0.8012) | info on Rv1589/bioB |
| Rv3882c/eccE1 | (cc=0.7959) | info on Rv3882c/eccE1 |
| Rv3615c/espC | (cc=0.7908) | info on Rv3615c/espC |
| Rv1590/- | (cc=0.7866) | info on Rv1590/- |
Correlation of Rv3502c/- with Rv3615c/espC
Normalized LFCs for Rv3502c/-:
(description and provenance of datasets)
| Rv3502c/- | Rv3615c/espC | |
| Fe_supp_jason_reseq | -0.336 | -0.076 |
| low_pH_jason_reseq | -1.28 | -0.791 |
| NO_jason_reseq | -0.016 | -0.179 |
| B6_jason_reseq | -3.524 | -2.738 |
| MHCII_jason_reseq | -3.922 | -3.219 |
| Isoniazid02 | -2.007 | -1.534 |
| Rifampicin4 | 0.669 | 0.663 |
| Ethambutol3 | -1.852 | 0.61 |
| Meropenem3 | -1.668 | -0.927 |
| Vancomycin16 | -0.525 | -0.438 |
| Rv2680_day32 | -2.581 | -2.287 |
| H37Rv_KO_MarP | 0.508 | 0.763 |
| hypoxia_3wks | -0.714 | -0.642 |
| hypoxia_6wks | -0.687 | -0.453 |
| glycerol | 0.69 | -1.542 |
| cholesterol | -3.872 | -2.127 |
| AJ | -4.212 | -4.615 |
| Bibs02 | -4.722 | -6.0 |
| Bibs02c | -5.065 | -5.515 |
| BL6 | -2.7 | -1.925 |
| BL6a | -4.653 | -4.038 |
| BXD01 | -2.668 | -2.432 |
| BXD010 | -3.551 | -1.317 |
| BXD011 | -0.815 | -2.379 |
| BXD03 | -1.315 | -2.734 |
| BXD04 | -1.429 | -1.094 |
| BXD05 | -2.501 | -2.385 |
| BXD06 | -2.961 | -3.264 |
| BXD07 | -3.253 | -2.435 |
| BXD08 | -1.451 | -3.429 |
| BXD09 | -3.117 | -3.21 |
| CAST | -3.824 | -4.656 |
| CCcont | -0.174 | 0.08 |
| DS01 | -4.965 | -5.297 |
| DS02 | -3.316 | -6.0 |
| DS04 | -3.781 | -3.797 |
| DS0c | -5.251 | -6.0 |
| GP01 | -1.835 | -1.918 |
| GP02 | -1.846 | -2.771 |
| GP0c | -0.039 | -0.687 |
| NOD | -2.804 | -0.556 |
| NZO | -2.861 | -4.599 |
| PWK | -3.645 | -5.419 |
| H37Rv_KO_CtpC | -3.507 | -1.589 |
| H37Rv_KO_CtpD | -2.53 | -0.43 |
| H37Rv_KO_Rv1272 | -2.502 | -1.432 |
| H37Rv_KO_SugABC | 0.205 | -1.494 |
| H37Rv_KO_MbtN | -1.675 | 0.721 |
| Trans05 | -2.747 | -1.485 |
| macrophage_unactivated | 0.407 | -1.203 |
| IL1 | -0.483 | -0.303 |
| Rapamycin | -0.844 | -0.761 |
| Tcell | -2.955 | -2.278 |
| GMCSF | 0.1 | 0.887 |
| IFNab | 1.787 | 0.629 |
| IFNg | 0.526 | -1.924 |
| IFNg_GMCSF1 | 0.349 | -1.304 |
| Rv1432_day32 | -1.936 | -2.181 |
| Rv1565c_day32 | -5.231 | -3.023 |
| secA2_input | -0.125 | 0.844 |
| delta_Rv3594 | 0.104 | 0.45 |
| delta_Rv3717 | 0.113 | -0.276 |
| delta_Rv3811 | 0.291 | -0.611 |
| delta_Rv0954 | 0.253 | 0.062 |
| PonA1 | -0.246 | -1.032 |
| EccD1_KO | -0.585 | -0.247 |
| EspI_KO | -0.376 | -0.639 |
| PE35_KO | -1.018 | -0.096 |
| PPE68_KO | -0.886 | -0.403 |
| glycerol2 | -0.593 | 0.556 |
| lignocerate | 0.084 | 0.544 |
| oleate | -1.195 | -0.103 |
| phosphatidylcholine | -0.683 | -0.066 |
| acetate | -0.652 | -0.146 |
| glucAc | 0.216 | -0.122 |
| Rv0950ko | 0.09 | -0.256 |
| Rv1096ko | 0.03 | -1.122 |
| Rv3684ko | 0.098 | -0.668 |
| delta_otsA_trehalose | -0.09 | 1.448 |