Top 10 genes with highest correlation to Rv3500c/yrbE4B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3495c/lprN | (cc=0.9165) | info on Rv3495c/lprN |
| Rv3496c/mce4D | (cc=0.9001) | info on Rv3496c/mce4D |
| Rv3499c/mce4A | (cc=0.8739) | info on Rv3499c/mce4A |
| Rv3497c/mce4C | (cc=0.8719) | info on Rv3497c/mce4C |
| Rv3501c/yrbE4A | (cc=0.8667) | info on Rv3501c/yrbE4A |
| Rv3494c/mce4F | (cc=0.8492) | info on Rv3494c/mce4F |
| Rv3498c/mce4B | (cc=0.8343) | info on Rv3498c/mce4B |
| Rv3492c/- | (cc=0.7889) | info on Rv3492c/- |
| Rv0381c/- | (cc=0.7666) | info on Rv0381c/- |
| Rv3493c/- | (cc=0.762) | info on Rv3493c/- |
Correlation of Rv3500c/yrbE4B with Rv3501c/yrbE4A
Normalized LFCs for Rv3500c/yrbE4B:
(description and provenance of datasets)
| Rv3500c/yrbE4B | Rv3501c/yrbE4A | |
| Fe_supp_jason_reseq | 0.041 | 1.012 |
| low_pH_jason_reseq | -0.982 | -0.326 |
| NO_jason_reseq | 0.562 | 0.58 |
| B6_jason_reseq | -1.459 | -1.279 |
| MHCII_jason_reseq | -2.141 | -2.391 |
| Isoniazid02 | 0.013 | 0.595 |
| Rifampicin4 | -0.038 | 0.628 |
| Ethambutol3 | 0.225 | 1.582 |
| Meropenem3 | -0.568 | 0.162 |
| Vancomycin16 | 0.533 | 0.806 |
| Rv2680_day32 | -2.969 | -2.546 |
| H37Rv_KO_MarP | 0.028 | 0.593 |
| hypoxia_3wks | 0.391 | 0.02 |
| hypoxia_6wks | 0.155 | 0.01 |
| glycerol | -2.465 | -0.724 |
| cholesterol | -4.573 | -3.897 |
| AJ | -3.361 | -3.578 |
| Bibs02 | -0.917 | -0.253 |
| Bibs02c | -1.103 | -1.17 |
| BL6 | -1.464 | 0.509 |
| BL6a | -1.852 | -0.839 |
| BXD01 | -1.302 | -0.422 |
| BXD010 | -0.174 | -0.514 |
| BXD011 | -0.948 | -0.475 |
| BXD03 | -1.828 | -0.332 |
| BXD04 | -1.196 | -0.478 |
| BXD05 | -0.647 | -0.148 |
| BXD06 | -1.092 | -0.545 |
| BXD07 | -1.748 | -0.526 |
| BXD08 | -1.596 | -0.534 |
| BXD09 | -1.394 | -0.544 |
| CAST | -2.544 | -3.056 |
| CCcont | -0.652 | 1.143 |
| DS01 | -3.247 | -1.906 |
| DS02 | -2.382 | -2.002 |
| DS04 | -2.534 | -1.834 |
| DS0c | -1.516 | -2.077 |
| GP01 | -0.082 | 0.999 |
| GP02 | -0.734 | 0.813 |
| GP0c | -0.408 | 0.702 |
| NOD | -2.673 | -1.181 |
| NZO | -2.114 | -2.647 |
| PWK | -2.316 | -2.404 |
| H37Rv_KO_CtpC | -1.028 | -1.477 |
| H37Rv_KO_CtpD | -0.447 | -0.385 |
| H37Rv_KO_Rv1272 | -0.852 | 0.593 |
| H37Rv_KO_SugABC | 0.509 | 0.685 |
| H37Rv_KO_MbtN | 0.869 | 1.06 |
| Trans05 | -0.127 | 0.019 |
| macrophage_unactivated | -0.619 | -1.061 |
| IL1 | 2.213 | 2.035 |
| Rapamycin | 2.059 | 1.847 |
| Tcell | 0.257 | -0.456 |
| GMCSF | -1.964 | -1.677 |
| IFNab | -2.08 | -1.871 |
| IFNg | -0.612 | -0.604 |
| IFNg_GMCSF1 | -1.049 | -0.635 |
| Rv1432_day32 | -2.967 | -2.587 |
| Rv1565c_day32 | -2.853 | -2.279 |
| secA2_input | -0.316 | -0.647 |
| delta_Rv3594 | -0.066 | 0.506 |
| delta_Rv3717 | -0.42 | -0.206 |
| delta_Rv3811 | -0.04 | 0.248 |
| delta_Rv0954 | -0.419 | -0.634 |
| PonA1 | 0.129 | 0.031 |
| EccD1_KO | 0.572 | -0.135 |
| EspI_KO | 0.088 | -0.405 |
| PE35_KO | -0.362 | -0.385 |
| PPE68_KO | -0.195 | -0.058 |
| glycerol2 | -0.412 | 0.118 |
| lignocerate | 0.546 | 1.43 |
| oleate | 1.51 | 0.726 |
| phosphatidylcholine | -0.01 | 0.22 |
| acetate | -0.288 | 0.959 |
| glucAc | 0.103 | 0.671 |
| Rv0950ko | 0.446 | 0.03 |
| Rv1096ko | 0.238 | 0.347 |
| Rv3684ko | 0.563 | 0.989 |
| delta_otsA_trehalose | 0.05 | 0.341 |