Top 10 genes with highest correlation to Rv3500c/yrbE4B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3495c/lprN | (cc=0.9165) | info on Rv3495c/lprN |
| Rv3496c/mce4D | (cc=0.9001) | info on Rv3496c/mce4D |
| Rv3499c/mce4A | (cc=0.8739) | info on Rv3499c/mce4A |
| Rv3497c/mce4C | (cc=0.8719) | info on Rv3497c/mce4C |
| Rv3501c/yrbE4A | (cc=0.8667) | info on Rv3501c/yrbE4A |
| Rv3494c/mce4F | (cc=0.8492) | info on Rv3494c/mce4F |
| Rv3498c/mce4B | (cc=0.8343) | info on Rv3498c/mce4B |
| Rv3492c/- | (cc=0.7889) | info on Rv3492c/- |
| Rv0381c/- | (cc=0.7666) | info on Rv0381c/- |
| Rv3493c/- | (cc=0.762) | info on Rv3493c/- |
Correlation of Rv3500c/yrbE4B with Rv3493c/-
Normalized LFCs for Rv3500c/yrbE4B:
(description and provenance of datasets)
| Rv3500c/yrbE4B | Rv3493c/- | |
| Fe_supp_jason_reseq | 0.041 | -0.365 |
| low_pH_jason_reseq | -0.982 | -1.718 |
| NO_jason_reseq | 0.562 | -0.819 |
| B6_jason_reseq | -1.459 | -1.714 |
| MHCII_jason_reseq | -2.141 | -2.063 |
| Isoniazid02 | 0.013 | -0.343 |
| Rifampicin4 | -0.038 | 0.596 |
| Ethambutol3 | 0.225 | 0.071 |
| Meropenem3 | -0.568 | -0.761 |
| Vancomycin16 | 0.533 | 0.35 |
| Rv2680_day32 | -2.969 | 0.423 |
| H37Rv_KO_MarP | 0.028 | -0.598 |
| hypoxia_3wks | 0.391 | 0.231 |
| hypoxia_6wks | 0.155 | -0.965 |
| glycerol | -2.465 | -1.102 |
| cholesterol | -4.573 | -3.343 |
| AJ | -3.361 | -1.403 |
| Bibs02 | -0.917 | -2.628 |
| Bibs02c | -1.103 | -2.657 |
| BL6 | -1.464 | -2.762 |
| BL6a | -1.852 | -2.847 |
| BXD01 | -1.302 | -1.604 |
| BXD010 | -0.174 | -2.712 |
| BXD011 | -0.948 | -2.085 |
| BXD03 | -1.828 | -2.006 |
| BXD04 | -1.196 | -1.272 |
| BXD05 | -0.647 | -1.191 |
| BXD06 | -1.092 | -2.114 |
| BXD07 | -1.748 | -1.87 |
| BXD08 | -1.596 | -2.601 |
| BXD09 | -1.394 | -2.153 |
| CAST | -2.544 | -2.836 |
| CCcont | -0.652 | -0.966 |
| DS01 | -3.247 | -3.29 |
| DS02 | -2.382 | -2.108 |
| DS04 | -2.534 | -1.717 |
| DS0c | -1.516 | -2.102 |
| GP01 | -0.082 | 0.502 |
| GP02 | -0.734 | -0.556 |
| GP0c | -0.408 | -0.416 |
| NOD | -2.673 | -2.605 |
| NZO | -2.114 | -1.166 |
| PWK | -2.316 | -2.345 |
| H37Rv_KO_CtpC | -1.028 | -2.489 |
| H37Rv_KO_CtpD | -0.447 | -2.221 |
| H37Rv_KO_Rv1272 | -0.852 | -0.943 |
| H37Rv_KO_SugABC | 0.509 | 0.799 |
| H37Rv_KO_MbtN | 0.869 | 1.151 |
| Trans05 | -0.127 | -0.569 |
| macrophage_unactivated | -0.619 | -1.092 |
| IL1 | 2.213 | 1.975 |
| Rapamycin | 2.059 | 2.949 |
| Tcell | 0.257 | 0.642 |
| GMCSF | -1.964 | -1.18 |
| IFNab | -2.08 | -1.769 |
| IFNg | -0.612 | -1.267 |
| IFNg_GMCSF1 | -1.049 | -1.244 |
| Rv1432_day32 | -2.967 | -2.092 |
| Rv1565c_day32 | -2.853 | -2.088 |
| secA2_input | -0.316 | -0.294 |
| delta_Rv3594 | -0.066 | 0.112 |
| delta_Rv3717 | -0.42 | -0.077 |
| delta_Rv3811 | -0.04 | -0.973 |
| delta_Rv0954 | -0.419 | -0.411 |
| PonA1 | 0.129 | 0.664 |
| EccD1_KO | 0.572 | 1.796 |
| EspI_KO | 0.088 | 0.961 |
| PE35_KO | -0.362 | 0.758 |
| PPE68_KO | -0.195 | 1.705 |
| glycerol2 | -0.412 | -0.787 |
| lignocerate | 0.546 | 0.358 |
| oleate | 1.51 | 1.018 |
| phosphatidylcholine | -0.01 | -0.517 |
| acetate | -0.288 | -0.201 |
| glucAc | 0.103 | -0.478 |
| Rv0950ko | 0.446 | 0.464 |
| Rv1096ko | 0.238 | 1.502 |
| Rv3684ko | 0.563 | 0.504 |
| delta_otsA_trehalose | 0.05 | 0.861 |