Top 10 genes with highest correlation to Rv3492c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3499c/mce4A | (cc=0.8119) | info on Rv3499c/mce4A |
| Rv3500c/yrbE4B | (cc=0.7889) | info on Rv3500c/yrbE4B |
| Rv3496c/mce4D | (cc=0.781) | info on Rv3496c/mce4D |
| Rv3501c/yrbE4A | (cc=0.7611) | info on Rv3501c/yrbE4A |
| Rv3494c/mce4F | (cc=0.758) | info on Rv3494c/mce4F |
| Rv3497c/mce4C | (cc=0.7481) | info on Rv3497c/mce4C |
| Rv3498c/mce4B | (cc=0.7439) | info on Rv3498c/mce4B |
| Rv3495c/lprN | (cc=0.7326) | info on Rv3495c/lprN |
| Rv2047c/- | (cc=0.6411) | info on Rv2047c/- |
| Rv3723/- | (cc=0.6309) | info on Rv3723/- |
Correlation of Rv3492c/- with Rv3495c/lprN
Normalized LFCs for Rv3492c/-:
(description and provenance of datasets)
| Rv3492c/- | Rv3495c/lprN | |
| Fe_supp_jason_reseq | 1.28 | 0.295 |
| low_pH_jason_reseq | 0.02 | 0.304 |
| NO_jason_reseq | -0.336 | 0.538 |
| B6_jason_reseq | -2.485 | -1.572 |
| MHCII_jason_reseq | -2.817 | -2.034 |
| Isoniazid02 | 0.308 | 0.131 |
| Rifampicin4 | 0.333 | 0.764 |
| Ethambutol3 | 0.303 | 0.195 |
| Meropenem3 | 0.084 | -1.224 |
| Vancomycin16 | 0.846 | 0.676 |
| Rv2680_day32 | -1.861 | -2.504 |
| H37Rv_KO_MarP | -0.185 | 0.254 |
| hypoxia_3wks | -0.367 | 0.132 |
| hypoxia_6wks | 0.487 | 0.228 |
| glycerol | -1.802 | -1.343 |
| cholesterol | -3.5 | -4.151 |
| AJ | -2.64 | -3.627 |
| Bibs02 | -3.192 | -0.527 |
| Bibs02c | -0.227 | -1.426 |
| BL6 | -0.795 | -1.169 |
| BL6a | -1.078 | -1.741 |
| BXD01 | -2.075 | -1.162 |
| BXD010 | 0.986 | -1.373 |
| BXD011 | -0.738 | -1.376 |
| BXD03 | -0.834 | -1.553 |
| BXD04 | -0.589 | -1.191 |
| BXD05 | -0.243 | -1.267 |
| BXD06 | -1.068 | -1.2 |
| BXD07 | -1.857 | -1.344 |
| BXD08 | -2.119 | -1.321 |
| BXD09 | -1.187 | -1.677 |
| CAST | -2.766 | -2.604 |
| CCcont | 0.32 | -0.727 |
| DS01 | -2.479 | -3.217 |
| DS02 | -2.163 | -1.727 |
| DS04 | -1.779 | -2.561 |
| DS0c | -2.157 | -1.193 |
| GP01 | -1.219 | -0.207 |
| GP02 | -0.805 | -1.198 |
| GP0c | 0.2 | -0.478 |
| NOD | -1.897 | -2.54 |
| NZO | -2.91 | -1.78 |
| PWK | -1.209 | -1.724 |
| H37Rv_KO_CtpC | -0.801 | -1.837 |
| H37Rv_KO_CtpD | -0.04 | -0.498 |
| H37Rv_KO_Rv1272 | 0.438 | -0.604 |
| H37Rv_KO_SugABC | -1.292 | -0.482 |
| H37Rv_KO_MbtN | 1.725 | 0.073 |
| Trans05 | -0.113 | -0.95 |
| macrophage_unactivated | -2.415 | -0.811 |
| IL1 | 2.308 | 2.462 |
| Rapamycin | 1.114 | 1.921 |
| Tcell | -1.515 | 0.414 |
| GMCSF | -2.881 | -1.901 |
| IFNab | -2.165 | -1.823 |
| IFNg | -1.205 | -1.109 |
| IFNg_GMCSF1 | -1.769 | -2.3 |
| Rv1432_day32 | -2.847 | -2.415 |
| Rv1565c_day32 | -3.183 | -3.192 |
| secA2_input | 0.172 | -0.399 |
| delta_Rv3594 | -0.806 | 0.353 |
| delta_Rv3717 | -1.524 | 0.478 |
| delta_Rv3811 | -2.003 | 0.214 |
| delta_Rv0954 | -0.221 | 0.178 |
| PonA1 | -1.575 | 0.93 |
| EccD1_KO | 0.516 | 0.645 |
| EspI_KO | 0.625 | 0.274 |
| PE35_KO | 0.233 | -0.265 |
| PPE68_KO | 0.733 | 0.406 |
| glycerol2 | -0.09 | -0.43 |
| lignocerate | 0.608 | 0.425 |
| oleate | 0.77 | 1.392 |
| phosphatidylcholine | -0.283 | -0.255 |
| acetate | -0.725 | -0.451 |
| glucAc | 0.516 | -0.519 |
| Rv0950ko | 0.654 | 0.184 |
| Rv1096ko | 1.224 | 1.598 |
| Rv3684ko | -0.079 | 1.094 |
| delta_otsA_trehalose | -0.351 | -1.248 |