Top 10 genes with highest correlation to Rv3468c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2007c/fdxA | (cc=0.5692) | info on Rv2007c/fdxA |
| Rv1186c/- | (cc=0.5674) | info on Rv1186c/- |
| Rv0851c/- | (cc=0.551) | info on Rv0851c/- |
| Rv0442c/PPE10 | (cc=0.5465) | info on Rv0442c/PPE10 |
| Rv3520c/- | (cc=0.5379) | info on Rv3520c/- |
| Rv3819/- | (cc=0.5143) | info on Rv3819/- |
| Rv2237A/- | (cc=0.5017) | info on Rv2237A/- |
| Rv0396/- | (cc=0.498) | info on Rv0396/- |
| Rv0730/- | (cc=0.4899) | info on Rv0730/- |
| Rv2627c/- | (cc=0.4874) | info on Rv2627c/- |
Correlation of Rv3468c/- with Rv3520c/-
Normalized LFCs for Rv3468c/-:
(description and provenance of datasets)
| Rv3468c/- | Rv3520c/- | |
| Fe_supp_jason_reseq | -0.104 | 0.009 |
| low_pH_jason_reseq | -0.315 | -0.442 |
| NO_jason_reseq | -0.042 | -0.171 |
| B6_jason_reseq | 0.406 | -0.38 |
| MHCII_jason_reseq | 0.672 | 0.061 |
| Isoniazid02 | -0.068 | -0.047 |
| Rifampicin4 | 0.474 | -0.325 |
| Ethambutol3 | 0.028 | -0.304 |
| Meropenem3 | 0.134 | -0.229 |
| Vancomycin16 | 0.409 | 0.133 |
| Rv2680_day32 | -0.579 | 0.072 |
| H37Rv_KO_MarP | 0.941 | 0.816 |
| hypoxia_3wks | 0.048 | -0.104 |
| hypoxia_6wks | 0.196 | -0.706 |
| glycerol | -1.011 | 0.035 |
| cholesterol | -1.651 | -0.041 |
| AJ | 0.289 | -0.124 |
| Bibs02 | 0.697 | -0.032 |
| Bibs02c | -0.277 | 0.553 |
| BL6 | 0.784 | 0.064 |
| BL6a | -0.263 | 0.133 |
| BXD01 | -0.319 | -0.26 |
| BXD010 | -0.327 | -0.552 |
| BXD011 | 0.378 | -0.597 |
| BXD03 | 0.0 | -0.181 |
| BXD04 | -0.09 | -0.026 |
| BXD05 | 0.36 | -0.706 |
| BXD06 | 0.011 | -0.278 |
| BXD07 | 0.084 | -0.575 |
| BXD08 | -0.165 | -0.371 |
| BXD09 | -0.225 | -0.803 |
| CAST | 0.501 | -0.098 |
| CCcont | 0.012 | -0.053 |
| DS01 | 0.262 | -0.026 |
| DS02 | 0.646 | -0.241 |
| DS04 | 0.541 | -0.069 |
| DS0c | 0.402 | 0.038 |
| GP01 | -1.3 | -0.512 |
| GP02 | -1.096 | -1.016 |
| GP0c | -1.138 | -1.122 |
| NOD | 0.28 | 0.166 |
| NZO | -0.761 | 0.405 |
| PWK | 0.217 | -0.186 |
| H37Rv_KO_CtpC | -0.464 | -0.18 |
| H37Rv_KO_CtpD | -0.557 | -0.33 |
| H37Rv_KO_Rv1272 | -0.138 | 0.177 |
| H37Rv_KO_SugABC | 1.076 | 0.145 |
| H37Rv_KO_MbtN | -0.654 | -0.259 |
| Trans05 | -1.431 | -0.115 |
| macrophage_unactivated | -0.136 | -0.366 |
| IL1 | 0.125 | -0.718 |
| Rapamycin | 0.095 | -0.546 |
| Tcell | -0.544 | 0.222 |
| GMCSF | 0.026 | 0.198 |
| IFNab | -0.263 | -0.284 |
| IFNg | -0.478 | -0.497 |
| IFNg_GMCSF1 | -0.035 | -0.11 |
| Rv1432_day32 | 0.207 | -0.378 |
| Rv1565c_day32 | 0.37 | 0.755 |
| secA2_input | -0.903 | -0.776 |
| delta_Rv3594 | -0.398 | -0.084 |
| delta_Rv3717 | 0.059 | -0.932 |
| delta_Rv3811 | -0.097 | -0.656 |
| delta_Rv0954 | -0.385 | -0.063 |
| PonA1 | 1.07 | 0.257 |
| EccD1_KO | -0.184 | 0.372 |
| EspI_KO | -0.285 | 0.379 |
| PE35_KO | -0.204 | 0.061 |
| PPE68_KO | -0.272 | -0.016 |
| glycerol2 | 1.328 | 0.324 |
| lignocerate | 1.66 | 0.952 |
| oleate | 0.174 | 0.255 |
| phosphatidylcholine | 1.211 | 0.676 |
| acetate | 1.366 | 0.475 |
| glucAc | 1.46 | 0.499 |
| Rv0950ko | 0.268 | 0.905 |
| Rv1096ko | 1.855 | 0.368 |
| Rv3684ko | 1.389 | 0.596 |
| delta_otsA_trehalose | 3.54 | 1.04 |