Top 10 genes with highest correlation to Rv3468c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2007c/fdxA | (cc=0.5692) | info on Rv2007c/fdxA |
| Rv1186c/- | (cc=0.5674) | info on Rv1186c/- |
| Rv0851c/- | (cc=0.551) | info on Rv0851c/- |
| Rv0442c/PPE10 | (cc=0.5465) | info on Rv0442c/PPE10 |
| Rv3520c/- | (cc=0.5379) | info on Rv3520c/- |
| Rv3819/- | (cc=0.5143) | info on Rv3819/- |
| Rv2237A/- | (cc=0.5017) | info on Rv2237A/- |
| Rv0396/- | (cc=0.498) | info on Rv0396/- |
| Rv0730/- | (cc=0.4899) | info on Rv0730/- |
| Rv2627c/- | (cc=0.4874) | info on Rv2627c/- |
Correlation of Rv3468c/- with Rv0396/-
Normalized LFCs for Rv3468c/-:
(description and provenance of datasets)
| Rv3468c/- | Rv0396/- | |
| Fe_supp_jason_reseq | -0.104 | -1.018 |
| low_pH_jason_reseq | -0.315 | -0.512 |
| NO_jason_reseq | -0.042 | 0.0 |
| B6_jason_reseq | 0.406 | -0.679 |
| MHCII_jason_reseq | 0.672 | 0.783 |
| Isoniazid02 | -0.068 | -0.074 |
| Rifampicin4 | 0.474 | 0.311 |
| Ethambutol3 | 0.028 | 0.218 |
| Meropenem3 | 0.134 | 0.204 |
| Vancomycin16 | 0.409 | 0.427 |
| Rv2680_day32 | -0.579 | -1.194 |
| H37Rv_KO_MarP | 0.941 | -0.031 |
| hypoxia_3wks | 0.048 | -0.112 |
| hypoxia_6wks | 0.196 | -0.643 |
| glycerol | -1.011 | -2.992 |
| cholesterol | -1.651 | -1.623 |
| AJ | 0.289 | -0.165 |
| Bibs02 | 0.697 | 0.162 |
| Bibs02c | -0.277 | 0.717 |
| BL6 | 0.784 | -1.678 |
| BL6a | -0.263 | -1.111 |
| BXD01 | -0.319 | -2.09 |
| BXD010 | -0.327 | 0.323 |
| BXD011 | 0.378 | -1.109 |
| BXD03 | 0.0 | -1.796 |
| BXD04 | -0.09 | -2.419 |
| BXD05 | 0.36 | -0.557 |
| BXD06 | 0.011 | -0.233 |
| BXD07 | 0.084 | -1.014 |
| BXD08 | -0.165 | -1.97 |
| BXD09 | -0.225 | -0.848 |
| CAST | 0.501 | 0.537 |
| CCcont | 0.012 | -1.983 |
| DS01 | 0.262 | -0.39 |
| DS02 | 0.646 | -0.654 |
| DS04 | 0.541 | 0.538 |
| DS0c | 0.402 | 0.27 |
| GP01 | -1.3 | -1.743 |
| GP02 | -1.096 | -1.383 |
| GP0c | -1.138 | -1.412 |
| NOD | 0.28 | 0.329 |
| NZO | -0.761 | 0.0 |
| PWK | 0.217 | 0.872 |
| H37Rv_KO_CtpC | -0.464 | -0.98 |
| H37Rv_KO_CtpD | -0.557 | -2.545 |
| H37Rv_KO_Rv1272 | -0.138 | 0.491 |
| H37Rv_KO_SugABC | 1.076 | -1.11 |
| H37Rv_KO_MbtN | -0.654 | -1.051 |
| Trans05 | -1.431 | 0.758 |
| macrophage_unactivated | -0.136 | -0.972 |
| IL1 | 0.125 | -0.507 |
| Rapamycin | 0.095 | 0.242 |
| Tcell | -0.544 | -1.095 |
| GMCSF | 0.026 | -0.927 |
| IFNab | -0.263 | -1.732 |
| IFNg | -0.478 | 0.436 |
| IFNg_GMCSF1 | -0.035 | -0.496 |
| Rv1432_day32 | 0.207 | -0.016 |
| Rv1565c_day32 | 0.37 | 2.267 |
| secA2_input | -0.903 | -0.725 |
| delta_Rv3594 | -0.398 | -0.052 |
| delta_Rv3717 | 0.059 | -0.088 |
| delta_Rv3811 | -0.097 | -0.479 |
| delta_Rv0954 | -0.385 | 0.394 |
| PonA1 | 1.07 | 0.601 |
| EccD1_KO | -0.184 | -0.773 |
| EspI_KO | -0.285 | -0.074 |
| PE35_KO | -0.204 | 0.324 |
| PPE68_KO | -0.272 | -0.384 |
| glycerol2 | 1.328 | 1.233 |
| lignocerate | 1.66 | 1.287 |
| oleate | 0.174 | -1.337 |
| phosphatidylcholine | 1.211 | 1.0 |
| acetate | 1.366 | 2.73 |
| glucAc | 1.46 | 1.378 |
| Rv0950ko | 0.268 | 1.173 |
| Rv1096ko | 1.855 | 1.695 |
| Rv3684ko | 1.389 | 1.143 |
| delta_otsA_trehalose | 3.54 | -0.15 |