Top 10 genes with highest correlation to Rv3463/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0393/- | (cc=0.5505) | info on Rv0393/- |
| Rv3641c/fic | (cc=0.503) | info on Rv3641c/fic |
| Rv0747/PE_PGRS10 | (cc=0.4958) | info on Rv0747/PE_PGRS10 |
| Rv1116A/- | (cc=0.4903) | info on Rv1116A/- |
| Rv1041c/- | (cc=0.4785) | info on Rv1041c/- |
| Rv1646/PE17 | (cc=0.4721) | info on Rv1646/PE17 |
| Rv3307/deoD | (cc=0.4683) | info on Rv3307/deoD |
| Rv2232/ptkA | (cc=0.4566) | info on Rv2232/ptkA |
| Rv3777/- | (cc=0.4534) | info on Rv3777/- |
| Rv0775/- | (cc=0.4486) | info on Rv0775/- |
Correlation of Rv3463/- with Rv3307/deoD
Normalized LFCs for Rv3463/-:
(description and provenance of datasets)
| Rv3463/- | Rv3307/deoD | |
| Fe_supp_jason_reseq | -0.474 | -0.863 |
| low_pH_jason_reseq | -0.557 | -0.189 |
| NO_jason_reseq | -0.732 | 0.48 |
| B6_jason_reseq | 0.192 | -0.363 |
| MHCII_jason_reseq | -0.018 | -0.065 |
| Isoniazid02 | -0.997 | -0.675 |
| Rifampicin4 | -0.046 | -0.357 |
| Ethambutol3 | 0.491 | -0.878 |
| Meropenem3 | 0.906 | 1.343 |
| Vancomycin16 | -0.249 | -0.65 |
| Rv2680_day32 | -0.349 | -0.286 |
| H37Rv_KO_MarP | 1.239 | 0.343 |
| hypoxia_3wks | 0.104 | 0.167 |
| hypoxia_6wks | -0.48 | 0.664 |
| glycerol | 0.436 | 0.812 |
| cholesterol | -0.369 | 0.153 |
| AJ | -0.348 | -0.607 |
| Bibs02 | -0.436 | 0.423 |
| Bibs02c | 0.149 | -1.015 |
| BL6 | -0.477 | 0.012 |
| BL6a | -0.297 | -1.113 |
| BXD01 | -0.246 | -0.265 |
| BXD010 | -0.202 | -0.567 |
| BXD011 | -0.601 | -0.778 |
| BXD03 | -0.311 | 0.262 |
| BXD04 | 0.516 | 0.314 |
| BXD05 | 0.026 | -0.914 |
| BXD06 | -0.296 | -0.213 |
| BXD07 | -0.377 | -0.162 |
| BXD08 | 0.135 | 0.328 |
| BXD09 | -0.496 | -0.384 |
| CAST | 0.409 | -0.574 |
| CCcont | -0.248 | 0.524 |
| DS01 | -0.265 | -0.022 |
| DS02 | 0.469 | -1.056 |
| DS04 | 0.365 | 0.755 |
| DS0c | 1.037 | 0.965 |
| GP01 | -0.833 | -0.294 |
| GP02 | -0.753 | -0.58 |
| GP0c | -0.626 | 0.232 |
| NOD | 0.36 | -1.159 |
| NZO | 0.25 | -0.968 |
| PWK | 0.077 | 0.861 |
| H37Rv_KO_CtpC | -0.033 | -0.241 |
| H37Rv_KO_CtpD | -1.108 | -1.8 |
| H37Rv_KO_Rv1272 | -0.976 | -1.954 |
| H37Rv_KO_SugABC | 0.465 | 0.543 |
| H37Rv_KO_MbtN | -0.508 | -0.532 |
| Trans05 | -0.629 | -0.114 |
| macrophage_unactivated | -1.689 | -0.694 |
| IL1 | -0.887 | -1.246 |
| Rapamycin | -1.059 | -0.046 |
| Tcell | -0.124 | 0.186 |
| GMCSF | 0.0 | 0.15 |
| IFNab | -1.079 | -0.227 |
| IFNg | -0.799 | -1.227 |
| IFNg_GMCSF1 | -0.729 | -0.333 |
| Rv1432_day32 | -0.438 | -1.109 |
| Rv1565c_day32 | -0.69 | -0.499 |
| secA2_input | 0.964 | 0.769 |
| delta_Rv3594 | -0.659 | -0.919 |
| delta_Rv3717 | -0.059 | 0.115 |
| delta_Rv3811 | -1.136 | -0.965 |
| delta_Rv0954 | -0.682 | -1.056 |
| PonA1 | -0.815 | -0.6 |
| EccD1_KO | 0.03 | 1.625 |
| EspI_KO | 0.148 | -0.174 |
| PE35_KO | -0.105 | 0.496 |
| PPE68_KO | 0.0 | -0.038 |
| glycerol2 | 1.401 | 0.553 |
| lignocerate | 0.426 | 0.0 |
| oleate | 0.024 | 0.449 |
| phosphatidylcholine | 0.819 | 0.789 |
| acetate | -0.414 | -0.153 |
| glucAc | -0.555 | 0.079 |
| Rv0950ko | 0.639 | 0.383 |
| Rv1096ko | 0.317 | 0.697 |
| Rv3684ko | -0.973 | 0.956 |
| delta_otsA_trehalose | 0.0 | 0.608 |