Top 10 genes with highest correlation to Rv3463/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0393/- | (cc=0.5505) | info on Rv0393/- |
| Rv3641c/fic | (cc=0.503) | info on Rv3641c/fic |
| Rv0747/PE_PGRS10 | (cc=0.4958) | info on Rv0747/PE_PGRS10 |
| Rv1116A/- | (cc=0.4903) | info on Rv1116A/- |
| Rv1041c/- | (cc=0.4785) | info on Rv1041c/- |
| Rv1646/PE17 | (cc=0.4721) | info on Rv1646/PE17 |
| Rv3307/deoD | (cc=0.4683) | info on Rv3307/deoD |
| Rv2232/ptkA | (cc=0.4566) | info on Rv2232/ptkA |
| Rv3777/- | (cc=0.4534) | info on Rv3777/- |
| Rv0775/- | (cc=0.4486) | info on Rv0775/- |
Correlation of Rv3463/- with Rv1646/PE17
Normalized LFCs for Rv3463/-:
(description and provenance of datasets)
| Rv3463/- | Rv1646/PE17 | |
| Fe_supp_jason_reseq | -0.474 | 0.358 |
| low_pH_jason_reseq | -0.557 | -0.348 |
| NO_jason_reseq | -0.732 | 0.181 |
| B6_jason_reseq | 0.192 | 0.787 |
| MHCII_jason_reseq | -0.018 | 0.025 |
| Isoniazid02 | -0.997 | 0.661 |
| Rifampicin4 | -0.046 | 0.439 |
| Ethambutol3 | 0.491 | 0.48 |
| Meropenem3 | 0.906 | -0.279 |
| Vancomycin16 | -0.249 | -0.167 |
| Rv2680_day32 | -0.349 | 0.621 |
| H37Rv_KO_MarP | 1.239 | -0.195 |
| hypoxia_3wks | 0.104 | 0.267 |
| hypoxia_6wks | -0.48 | -0.654 |
| glycerol | 0.436 | 0.329 |
| cholesterol | -0.369 | 0.325 |
| AJ | -0.348 | 0.948 |
| Bibs02 | -0.436 | 0.13 |
| Bibs02c | 0.149 | 0.606 |
| BL6 | -0.477 | -0.783 |
| BL6a | -0.297 | 0.445 |
| BXD01 | -0.246 | 0.031 |
| BXD010 | -0.202 | -0.225 |
| BXD011 | -0.601 | -0.667 |
| BXD03 | -0.311 | -0.788 |
| BXD04 | 0.516 | 0.394 |
| BXD05 | 0.026 | -0.054 |
| BXD06 | -0.296 | -0.508 |
| BXD07 | -0.377 | -0.498 |
| BXD08 | 0.135 | 0.082 |
| BXD09 | -0.496 | -0.457 |
| CAST | 0.409 | 1.018 |
| CCcont | -0.248 | -0.333 |
| DS01 | -0.265 | 0.631 |
| DS02 | 0.469 | 0.597 |
| DS04 | 0.365 | 0.396 |
| DS0c | 1.037 | 1.196 |
| GP01 | -0.833 | 0.043 |
| GP02 | -0.753 | 0.312 |
| GP0c | -0.626 | 0.025 |
| NOD | 0.36 | 0.765 |
| NZO | 0.25 | 0.525 |
| PWK | 0.077 | 0.479 |
| H37Rv_KO_CtpC | -0.033 | 0.071 |
| H37Rv_KO_CtpD | -1.108 | -0.623 |
| H37Rv_KO_Rv1272 | -0.976 | -0.306 |
| H37Rv_KO_SugABC | 0.465 | -0.135 |
| H37Rv_KO_MbtN | -0.508 | 0.468 |
| Trans05 | -0.629 | -0.072 |
| macrophage_unactivated | -1.689 | -0.729 |
| IL1 | -0.887 | -1.103 |
| Rapamycin | -1.059 | -1.264 |
| Tcell | -0.124 | -0.026 |
| GMCSF | 0.0 | -0.855 |
| IFNab | -1.079 | -1.403 |
| IFNg | -0.799 | -1.213 |
| IFNg_GMCSF1 | -0.729 | -0.698 |
| Rv1432_day32 | -0.438 | -0.339 |
| Rv1565c_day32 | -0.69 | -0.488 |
| secA2_input | 0.964 | -0.067 |
| delta_Rv3594 | -0.659 | 0.219 |
| delta_Rv3717 | -0.059 | -0.447 |
| delta_Rv3811 | -1.136 | 0.089 |
| delta_Rv0954 | -0.682 | -0.167 |
| PonA1 | -0.815 | 0.194 |
| EccD1_KO | 0.03 | 0.49 |
| EspI_KO | 0.148 | 0.351 |
| PE35_KO | -0.105 | 0.397 |
| PPE68_KO | 0.0 | 0.873 |
| glycerol2 | 1.401 | 0.573 |
| lignocerate | 0.426 | 0.32 |
| oleate | 0.024 | 0.763 |
| phosphatidylcholine | 0.819 | 0.882 |
| acetate | -0.414 | -0.253 |
| glucAc | -0.555 | -0.363 |
| Rv0950ko | 0.639 | 0.606 |
| Rv1096ko | 0.317 | -0.817 |
| Rv3684ko | -0.973 | -0.321 |
| delta_otsA_trehalose | 0.0 | -1.123 |