Top 10 genes with highest correlation to Rv3449/mycP4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3363c/- | (cc=0.5712) | info on Rv3363c/- |
| Rv2909c/rpsP | (cc=0.571) | info on Rv2909c/rpsP |
| Rv3043c/ctaD | (cc=0.5664) | info on Rv3043c/ctaD |
| Rv0277c/vapC25 | (cc=0.5595) | info on Rv0277c/vapC25 |
| Rv3455c/truA | (cc=0.5484) | info on Rv3455c/truA |
| Rv0526/- | (cc=0.5336) | info on Rv0526/- |
| Rv2655c/- | (cc=0.5269) | info on Rv2655c/- |
| Rv3168/- | (cc=0.4976) | info on Rv3168/- |
| Rv3248c/sahH | (cc=0.4937) | info on Rv3248c/sahH |
| Rv3710/leuA | (cc=0.4808) | info on Rv3710/leuA |
Correlation of Rv3449/mycP4 with Rv3455c/truA
Normalized LFCs for Rv3449/mycP4:
(description and provenance of datasets)
| Rv3449/mycP4 | Rv3455c/truA | |
| Fe_supp_jason_reseq | -1.108 | 0.706 |
| low_pH_jason_reseq | 0.577 | 1.561 |
| NO_jason_reseq | 0.832 | 0.633 |
| B6_jason_reseq | -0.559 | -0.153 |
| MHCII_jason_reseq | 0.4 | -0.135 |
| Isoniazid02 | 0.191 | 1.455 |
| Rifampicin4 | -0.125 | -0.712 |
| Ethambutol3 | -0.258 | 0.0 |
| Meropenem3 | 0.515 | 0.0 |
| Vancomycin16 | 0.196 | -0.698 |
| Rv2680_day32 | -0.403 | 0.0 |
| H37Rv_KO_MarP | 0.731 | -0.162 |
| hypoxia_3wks | -0.215 | 0.0 |
| hypoxia_6wks | -0.2 | 0.0 |
| glycerol | 1.204 | 0.856 |
| cholesterol | 0.557 | 0.0 |
| AJ | 0.235 | 0.0 |
| Bibs02 | 0.69 | 0.0 |
| Bibs02c | 0.212 | 0.0 |
| BL6 | -0.168 | 0.0 |
| BL6a | 0.367 | 0.0 |
| BXD01 | 0.886 | 0.0 |
| BXD010 | 0.669 | 0.0 |
| BXD011 | -0.288 | 0.0 |
| BXD03 | -0.442 | 0.0 |
| BXD04 | 0.783 | 0.0 |
| BXD05 | -0.672 | 0.0 |
| BXD06 | 0.05 | 0.0 |
| BXD07 | -0.068 | 0.0 |
| BXD08 | -0.093 | 0.0 |
| BXD09 | 0.167 | 0.0 |
| CAST | 0.152 | 0.0 |
| CCcont | 0.014 | 0.733 |
| DS01 | -0.046 | 0.0 |
| DS02 | -0.544 | 0.0 |
| DS04 | -0.908 | 0.194 |
| DS0c | -0.68 | 0.0 |
| GP01 | -0.2 | 0.0 |
| GP02 | -0.188 | 0.0 |
| GP0c | -0.391 | 0.0 |
| NOD | 0.692 | 0.0 |
| NZO | 0.185 | 0.0 |
| PWK | 0.0 | 0.0 |
| H37Rv_KO_CtpC | 0.301 | 0.0 |
| H37Rv_KO_CtpD | -0.993 | 0.127 |
| H37Rv_KO_Rv1272 | -0.995 | 0.0 |
| H37Rv_KO_SugABC | 1.089 | 0.0 |
| H37Rv_KO_MbtN | -0.246 | 0.799 |
| Trans05 | -0.264 | 0.0 |
| macrophage_unactivated | -0.915 | 0.0 |
| IL1 | -0.044 | 0.0 |
| Rapamycin | 0.626 | 0.0 |
| Tcell | 0.863 | 0.45 |
| GMCSF | -0.238 | 0.0 |
| IFNab | -0.045 | 0.417 |
| IFNg | -0.241 | 0.0 |
| IFNg_GMCSF1 | 1.2 | 0.0 |
| Rv1432_day32 | -0.763 | -0.632 |
| Rv1565c_day32 | -0.728 | 0.0 |
| secA2_input | 1.476 | 1.121 |
| delta_Rv3594 | -0.724 | -0.522 |
| delta_Rv3717 | -0.143 | -0.429 |
| delta_Rv3811 | -0.21 | -0.369 |
| delta_Rv0954 | -0.309 | -0.707 |
| PonA1 | -0.179 | -0.394 |
| EccD1_KO | -1.309 | 0.987 |
| EspI_KO | -0.596 | 1.56 |
| PE35_KO | -0.895 | -0.335 |
| PPE68_KO | -1.405 | -0.771 |
| glycerol2 | -2.382 | -5.511 |
| lignocerate | -1.579 | -4.956 |
| oleate | -2.328 | -5.77 |
| phosphatidylcholine | -2.088 | -5.7 |
| acetate | -2.1 | -0.352 |
| glucAc | -1.271 | -0.272 |
| Rv0950ko | -0.374 | -0.28 |
| Rv1096ko | -0.247 | 0.513 |
| Rv3684ko | -1.012 | 2.292 |
| delta_otsA_trehalose | 1.192 | 0.133 |