Top 10 genes with highest correlation to Rv3449/mycP4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3363c/- | (cc=0.5712) | info on Rv3363c/- |
| Rv2909c/rpsP | (cc=0.571) | info on Rv2909c/rpsP |
| Rv3043c/ctaD | (cc=0.5664) | info on Rv3043c/ctaD |
| Rv0277c/vapC25 | (cc=0.5595) | info on Rv0277c/vapC25 |
| Rv3455c/truA | (cc=0.5484) | info on Rv3455c/truA |
| Rv0526/- | (cc=0.5336) | info on Rv0526/- |
| Rv2655c/- | (cc=0.5269) | info on Rv2655c/- |
| Rv3168/- | (cc=0.4976) | info on Rv3168/- |
| Rv3248c/sahH | (cc=0.4937) | info on Rv3248c/sahH |
| Rv3710/leuA | (cc=0.4808) | info on Rv3710/leuA |
Correlation of Rv3449/mycP4 with Rv3363c/-
Normalized LFCs for Rv3449/mycP4:
(description and provenance of datasets)
| Rv3449/mycP4 | Rv3363c/- | |
| Fe_supp_jason_reseq | -1.108 | 0.289 |
| low_pH_jason_reseq | 0.577 | 0.775 |
| NO_jason_reseq | 0.832 | -0.63 |
| B6_jason_reseq | -0.559 | 0.575 |
| MHCII_jason_reseq | 0.4 | 0.795 |
| Isoniazid02 | 0.191 | 0.355 |
| Rifampicin4 | -0.125 | -1.194 |
| Ethambutol3 | -0.258 | -0.557 |
| Meropenem3 | 0.515 | -0.158 |
| Vancomycin16 | 0.196 | -0.172 |
| Rv2680_day32 | -0.403 | -0.786 |
| H37Rv_KO_MarP | 0.731 | 0.014 |
| hypoxia_3wks | -0.215 | -0.231 |
| hypoxia_6wks | -0.2 | 0.023 |
| glycerol | 1.204 | 0.408 |
| cholesterol | 0.557 | 0.45 |
| AJ | 0.235 | 0.079 |
| Bibs02 | 0.69 | 0.616 |
| Bibs02c | 0.212 | -0.821 |
| BL6 | -0.168 | 0.017 |
| BL6a | 0.367 | -0.25 |
| BXD01 | 0.886 | -0.374 |
| BXD010 | 0.669 | -0.073 |
| BXD011 | -0.288 | 0.018 |
| BXD03 | -0.442 | 0.449 |
| BXD04 | 0.783 | -0.044 |
| BXD05 | -0.672 | -0.137 |
| BXD06 | 0.05 | -0.136 |
| BXD07 | -0.068 | -0.12 |
| BXD08 | -0.093 | 0.01 |
| BXD09 | 0.167 | -0.222 |
| CAST | 0.152 | 0.506 |
| CCcont | 0.014 | -0.697 |
| DS01 | -0.046 | -0.51 |
| DS02 | -0.544 | -0.109 |
| DS04 | -0.908 | -1.105 |
| DS0c | -0.68 | -0.396 |
| GP01 | -0.2 | -1.314 |
| GP02 | -0.188 | -0.626 |
| GP0c | -0.391 | 0.162 |
| NOD | 0.692 | -0.096 |
| NZO | 0.185 | -0.465 |
| PWK | 0.0 | -0.142 |
| H37Rv_KO_CtpC | 0.301 | 0.252 |
| H37Rv_KO_CtpD | -0.993 | -1.654 |
| H37Rv_KO_Rv1272 | -0.995 | 0.584 |
| H37Rv_KO_SugABC | 1.089 | -0.14 |
| H37Rv_KO_MbtN | -0.246 | -0.538 |
| Trans05 | -0.264 | 1.0 |
| macrophage_unactivated | -0.915 | -0.448 |
| IL1 | -0.044 | 0.359 |
| Rapamycin | 0.626 | -0.322 |
| Tcell | 0.863 | -0.808 |
| GMCSF | -0.238 | -0.763 |
| IFNab | -0.045 | 0.0 |
| IFNg | -0.241 | 0.045 |
| IFNg_GMCSF1 | 1.2 | 0.666 |
| Rv1432_day32 | -0.763 | 1.076 |
| Rv1565c_day32 | -0.728 | -0.488 |
| secA2_input | 1.476 | -0.164 |
| delta_Rv3594 | -0.724 | -0.285 |
| delta_Rv3717 | -0.143 | -1.44 |
| delta_Rv3811 | -0.21 | -0.671 |
| delta_Rv0954 | -0.309 | -1.07 |
| PonA1 | -0.179 | -1.526 |
| EccD1_KO | -1.309 | 0.0 |
| EspI_KO | -0.596 | -1.047 |
| PE35_KO | -0.895 | -0.866 |
| PPE68_KO | -1.405 | -1.289 |
| glycerol2 | -2.382 | -2.812 |
| lignocerate | -1.579 | -1.844 |
| oleate | -2.328 | -2.2 |
| phosphatidylcholine | -2.088 | -2.286 |
| acetate | -2.1 | -2.276 |
| glucAc | -1.271 | -1.217 |
| Rv0950ko | -0.374 | 0.196 |
| Rv1096ko | -0.247 | 0.501 |
| Rv3684ko | -1.012 | -0.147 |
| delta_otsA_trehalose | 1.192 | 4.02 |