Top 10 genes with highest correlation to Rv3447c/eccC4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2306A/- | (cc=0.5932) | info on Rv2306A/- |
| Rv3566c/nat | (cc=0.5868) | info on Rv3566c/nat |
| Rv1997/ctpF | (cc=0.5771) | info on Rv1997/ctpF |
| Rv0968/- | (cc=0.5768) | info on Rv0968/- |
| Rv1774/- | (cc=0.5737) | info on Rv1774/- |
| Rv2566/- | (cc=0.5727) | info on Rv2566/- |
| Rv1647/- | (cc=0.5565) | info on Rv1647/- |
| Rv2577/- | (cc=0.5295) | info on Rv2577/- |
| Rv0754/PE_PGRS11 | (cc=0.5232) | info on Rv0754/PE_PGRS11 |
| Rv1148c/- | (cc=0.5207) | info on Rv1148c/- |
Correlation of Rv3447c/eccC4 with Rv2577/-
Normalized LFCs for Rv3447c/eccC4:
(description and provenance of datasets)
| Rv3447c/eccC4 | Rv2577/- | |
| Fe_supp_jason_reseq | 0.377 | 0.354 |
| low_pH_jason_reseq | -0.102 | -0.816 |
| NO_jason_reseq | -0.215 | 0.218 |
| B6_jason_reseq | 0.128 | 0.078 |
| MHCII_jason_reseq | 0.166 | 0.366 |
| Isoniazid02 | -2.02 | -1.035 |
| Rifampicin4 | 0.133 | 0.439 |
| Ethambutol3 | -0.233 | -0.212 |
| Meropenem3 | -1.743 | -1.344 |
| Vancomycin16 | -0.841 | -0.393 |
| Rv2680_day32 | 0.24 | 0.214 |
| H37Rv_KO_MarP | 0.972 | 0.459 |
| hypoxia_3wks | 0.255 | 0.056 |
| hypoxia_6wks | 0.134 | -0.182 |
| glycerol | -0.399 | -0.467 |
| cholesterol | -0.108 | 0.31 |
| AJ | 0.264 | 0.439 |
| Bibs02 | 0.499 | 0.229 |
| Bibs02c | -0.414 | 0.409 |
| BL6 | -0.443 | -0.047 |
| BL6a | -0.839 | -0.014 |
| BXD01 | -0.356 | -0.468 |
| BXD010 | -1.181 | -0.13 |
| BXD011 | -0.908 | 0.0 |
| BXD03 | -0.623 | -0.072 |
| BXD04 | 0.28 | -0.717 |
| BXD05 | -0.346 | -0.204 |
| BXD06 | -0.718 | -0.372 |
| BXD07 | -0.378 | -0.542 |
| BXD08 | 0.151 | -0.594 |
| BXD09 | -1.141 | -0.364 |
| CAST | 0.287 | -0.234 |
| CCcont | -0.633 | -0.239 |
| DS01 | 0.164 | 0.137 |
| DS02 | -0.054 | -0.523 |
| DS04 | -0.623 | -0.103 |
| DS0c | 0.71 | -0.099 |
| GP01 | 0.374 | -0.418 |
| GP02 | 1.007 | 0.896 |
| GP0c | -0.257 | 0.214 |
| NOD | -0.226 | -0.519 |
| NZO | 0.117 | 0.198 |
| PWK | 0.023 | 0.431 |
| H37Rv_KO_CtpC | 0.019 | -0.332 |
| H37Rv_KO_CtpD | -0.111 | 0.216 |
| H37Rv_KO_Rv1272 | 0.19 | -0.275 |
| H37Rv_KO_SugABC | 0.415 | -0.71 |
| H37Rv_KO_MbtN | -0.051 | -0.105 |
| Trans05 | -0.221 | -0.278 |
| macrophage_unactivated | -0.619 | -0.234 |
| IL1 | -0.495 | 0.036 |
| Rapamycin | -0.601 | 0.11 |
| Tcell | -0.264 | -0.495 |
| GMCSF | 0.203 | 0.124 |
| IFNab | -0.686 | -0.184 |
| IFNg | -0.446 | -0.163 |
| IFNg_GMCSF1 | -0.082 | -0.478 |
| Rv1432_day32 | 0.223 | 0.933 |
| Rv1565c_day32 | 0.085 | -0.182 |
| secA2_input | 0.825 | 0.064 |
| delta_Rv3594 | -0.5 | 0.125 |
| delta_Rv3717 | -0.076 | -0.248 |
| delta_Rv3811 | 0.057 | -0.66 |
| delta_Rv0954 | 0.121 | -0.056 |
| PonA1 | -0.141 | -0.384 |
| EccD1_KO | -0.214 | 0.158 |
| EspI_KO | 0.456 | 0.314 |
| PE35_KO | 0.411 | 0.368 |
| PPE68_KO | 0.451 | 0.205 |
| glycerol2 | 0.538 | 0.745 |
| lignocerate | 0.421 | 1.157 |
| oleate | 0.35 | 0.133 |
| phosphatidylcholine | 0.346 | 0.926 |
| acetate | 0.12 | 0.84 |
| glucAc | 0.074 | 0.863 |
| Rv0950ko | -0.431 | 0.739 |
| Rv1096ko | 0.703 | 0.739 |
| Rv3684ko | 0.599 | 0.393 |
| delta_otsA_trehalose | 0.939 | 0.753 |