Top 10 genes with highest correlation to Rv3432c/gadB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3772/hisC2 | (cc=0.5061) | info on Rv3772/hisC2 |
| Rv3736/- | (cc=0.4302) | info on Rv3736/- |
| Rv0834c/PE_PGRS14 | (cc=0.4097) | info on Rv0834c/PE_PGRS14 |
| Rv3523/ltp3 | (cc=0.4093) | info on Rv3523/ltp3 |
| Rv0110/- | (cc=0.4091) | info on Rv0110/- |
| Rv3171c/hpx | (cc=0.4049) | info on Rv3171c/hpx |
| Rv1177/fdxC | (cc=0.3936) | info on Rv1177/fdxC |
| Rv0597c/- | (cc=0.3918) | info on Rv0597c/- |
| Rv2571c/- | (cc=0.3898) | info on Rv2571c/- |
| Rv3785/- | (cc=0.3863) | info on Rv3785/- |
Correlation of Rv3432c/gadB with Rv3736/-
Normalized LFCs for Rv3432c/gadB:
(description and provenance of datasets)
| Rv3432c/gadB | Rv3736/- | |
| Fe_supp_jason_reseq | 0.26 | -1.176 |
| low_pH_jason_reseq | 0.156 | -0.206 |
| NO_jason_reseq | -0.541 | -0.31 |
| B6_jason_reseq | -0.496 | -0.605 |
| MHCII_jason_reseq | 0.08 | -0.367 |
| Isoniazid02 | -0.102 | -0.068 |
| Rifampicin4 | -0.068 | 0.108 |
| Ethambutol3 | 0.793 | 0.338 |
| Meropenem3 | 0.553 | 0.345 |
| Vancomycin16 | -0.05 | -0.109 |
| Rv2680_day32 | 0.454 | -0.095 |
| H37Rv_KO_MarP | 0.243 | 0.214 |
| hypoxia_3wks | -0.171 | -0.506 |
| hypoxia_6wks | -0.169 | -0.338 |
| glycerol | 0.275 | 0.265 |
| cholesterol | -0.12 | -0.11 |
| AJ | -0.234 | 1.049 |
| Bibs02 | 0.229 | 0.077 |
| Bibs02c | 0.39 | 0.171 |
| BL6 | 0.42 | -0.06 |
| BL6a | 0.342 | -0.253 |
| BXD01 | -0.21 | -0.45 |
| BXD010 | 0.278 | -0.305 |
| BXD011 | 0.229 | -0.475 |
| BXD03 | -0.093 | -0.474 |
| BXD04 | -0.042 | -0.461 |
| BXD05 | 0.754 | -0.053 |
| BXD06 | 0.272 | -0.236 |
| BXD07 | 0.169 | -0.245 |
| BXD08 | -0.171 | -0.141 |
| BXD09 | 0.134 | -0.434 |
| CAST | 0.018 | -0.167 |
| CCcont | 0.125 | -0.54 |
| DS01 | 0.198 | -0.084 |
| DS02 | 0.165 | -0.435 |
| DS04 | 0.285 | 0.555 |
| DS0c | -0.393 | 0.217 |
| GP01 | -0.465 | -0.221 |
| GP02 | 0.996 | 0.269 |
| GP0c | 0.563 | 0.156 |
| NOD | -0.43 | -0.612 |
| NZO | 0.152 | 0.247 |
| PWK | -0.05 | -0.117 |
| H37Rv_KO_CtpC | -0.186 | -0.265 |
| H37Rv_KO_CtpD | 0.672 | -0.029 |
| H37Rv_KO_Rv1272 | -0.222 | -0.541 |
| H37Rv_KO_SugABC | 0.39 | 0.567 |
| H37Rv_KO_MbtN | 0.148 | -0.473 |
| Trans05 | 0.284 | -0.382 |
| macrophage_unactivated | -0.246 | 0.047 |
| IL1 | 0.19 | -0.439 |
| Rapamycin | 0.227 | 0.021 |
| Tcell | -0.443 | -0.222 |
| GMCSF | -0.222 | -0.499 |
| IFNab | 0.239 | 0.175 |
| IFNg | 0.267 | -0.575 |
| IFNg_GMCSF1 | -0.119 | -0.239 |
| Rv1432_day32 | 0.46 | 0.518 |
| Rv1565c_day32 | 0.201 | -0.073 |
| secA2_input | 0.894 | -0.106 |
| delta_Rv3594 | -0.153 | -0.194 |
| delta_Rv3717 | -0.062 | 0.092 |
| delta_Rv3811 | -0.062 | 0.126 |
| delta_Rv0954 | 0.31 | 0.043 |
| PonA1 | 1.094 | 0.306 |
| EccD1_KO | 0.168 | 1.006 |
| EspI_KO | 0.066 | 0.436 |
| PE35_KO | -0.187 | 0.21 |
| PPE68_KO | -0.15 | 0.25 |
| glycerol2 | 0.171 | 0.509 |
| lignocerate | 0.235 | 0.217 |
| oleate | 0.233 | 0.594 |
| phosphatidylcholine | 0.296 | 0.979 |
| acetate | -0.08 | -0.451 |
| glucAc | -0.239 | -0.25 |
| Rv0950ko | 0.871 | 0.684 |
| Rv1096ko | 0.944 | 0.645 |
| Rv3684ko | 0.531 | 0.616 |
| delta_otsA_trehalose | -0.909 | -1.076 |