Top 10 genes with highest correlation to Rv3420c/rimI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2506/- | (cc=0.5635) | info on Rv2506/- |
| Rv3563/fadE32 | (cc=0.514) | info on Rv3563/fadE32 |
| Rv3876/espI | (cc=0.5075) | info on Rv3876/espI |
| Rv1731/gabD2 | (cc=0.4816) | info on Rv1731/gabD2 |
| Rv2140c/TB18.6 | (cc=0.4714) | info on Rv2140c/TB18.6 |
| Rv1963c/mce3R | (cc=0.4612) | info on Rv1963c/mce3R |
| Rv2583c/relA | (cc=0.4539) | info on Rv2583c/relA |
| Rv2404c/lepA | (cc=0.4488) | info on Rv2404c/lepA |
| Rv1069c/- | (cc=0.4472) | info on Rv1069c/- |
| Rv2502c/accD1 | (cc=0.4464) | info on Rv2502c/accD1 |
Correlation of Rv3420c/rimI with Rv2506/-
Normalized LFCs for Rv3420c/rimI:
(description and provenance of datasets)
| Rv3420c/rimI | Rv2506/- | |
| Fe_supp_jason_reseq | 0.087 | 0.257 |
| low_pH_jason_reseq | -1.201 | -1.241 |
| NO_jason_reseq | 0.354 | -0.299 |
| B6_jason_reseq | 1.094 | -1.395 |
| MHCII_jason_reseq | -0.177 | -2.083 |
| Isoniazid02 | -0.019 | 0.106 |
| Rifampicin4 | 0.717 | 0.263 |
| Ethambutol3 | 2.462 | 4.373 |
| Meropenem3 | 0.074 | -0.207 |
| Vancomycin16 | 1.438 | 0.194 |
| Rv2680_day32 | -0.082 | -2.588 |
| H37Rv_KO_MarP | 1.266 | 0.518 |
| hypoxia_3wks | -1.934 | -2.261 |
| hypoxia_6wks | -1.478 | -1.297 |
| glycerol | -0.503 | -0.819 |
| cholesterol | -0.39 | -3.208 |
| AJ | -1.755 | -1.338 |
| Bibs02 | -1.325 | -1.705 |
| Bibs02c | -1.387 | -2.736 |
| BL6 | -1.627 | -3.4 |
| BL6a | -0.794 | -2.834 |
| BXD01 | -0.406 | -2.884 |
| BXD010 | 0.556 | -2.876 |
| BXD011 | -1.05 | -2.362 |
| BXD03 | 0.0 | -1.046 |
| BXD04 | -1.108 | -1.617 |
| BXD05 | -0.181 | -3.53 |
| BXD06 | 0.432 | -2.074 |
| BXD07 | -0.523 | -3.4 |
| BXD08 | -0.963 | -3.03 |
| BXD09 | -1.018 | -2.073 |
| CAST | -1.979 | -1.8 |
| CCcont | -0.372 | -1.562 |
| DS01 | -2.496 | -2.643 |
| DS02 | -0.586 | -3.208 |
| DS04 | -1.467 | -1.689 |
| DS0c | -1.944 | -3.517 |
| GP01 | -1.462 | -1.748 |
| GP02 | -1.558 | -1.981 |
| GP0c | -0.582 | -2.802 |
| NOD | -1.006 | -0.984 |
| NZO | -1.15 | -2.297 |
| PWK | -0.095 | -0.563 |
| H37Rv_KO_CtpC | -0.438 | -2.634 |
| H37Rv_KO_CtpD | 0.187 | 0.329 |
| H37Rv_KO_Rv1272 | -1.163 | -3.308 |
| H37Rv_KO_SugABC | 0.388 | -2.796 |
| H37Rv_KO_MbtN | 0.285 | -1.131 |
| Trans05 | -0.988 | -3.26 |
| macrophage_unactivated | -0.537 | -2.02 |
| IL1 | -1.391 | -4.218 |
| Rapamycin | -1.795 | -5.352 |
| Tcell | -0.267 | 2.287 |
| GMCSF | 0.0 | -4.074 |
| IFNab | -0.514 | -4.477 |
| IFNg | -0.577 | -4.041 |
| IFNg_GMCSF1 | -2.665 | -5.153 |
| Rv1432_day32 | -0.218 | -0.825 |
| Rv1565c_day32 | 0.619 | -2.154 |
| secA2_input | 0.045 | 0.837 |
| delta_Rv3594 | 0.057 | -0.967 |
| delta_Rv3717 | 1.482 | -0.963 |
| delta_Rv3811 | 0.074 | -1.355 |
| delta_Rv0954 | -0.831 | -0.879 |
| PonA1 | -0.788 | 1.076 |
| EccD1_KO | -0.447 | -0.793 |
| EspI_KO | -0.094 | -1.996 |
| PE35_KO | -0.449 | -0.846 |
| PPE68_KO | -0.55 | -0.659 |
| glycerol2 | -0.967 | -0.815 |
| lignocerate | -0.205 | -1.805 |
| oleate | 0.139 | -1.287 |
| phosphatidylcholine | -0.041 | -0.65 |
| acetate | 0.457 | -0.474 |
| glucAc | -0.532 | -0.734 |
| Rv0950ko | 1.318 | 0.781 |
| Rv1096ko | 0.956 | -0.685 |
| Rv3684ko | 0.485 | -1.346 |
| delta_otsA_trehalose | 0.393 | 0.271 |