Top 10 genes with highest correlation to Rv3417c/groEL1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1194c/- | (cc=0.5972) | info on Rv1194c/- |
| Rv1610/- | (cc=0.5693) | info on Rv1610/- |
| Rv1195/PE13 | (cc=0.5517) | info on Rv1195/PE13 |
| Rv2167c/- | (cc=0.5273) | info on Rv2167c/- |
| Rv0360c/- | (cc=0.5192) | info on Rv0360c/- |
| Rv2479c/- | (cc=0.5074) | info on Rv2479c/- |
| Rv0578c/PE_PGRS7 | (cc=0.5028) | info on Rv0578c/PE_PGRS7 |
| Rv1756c/- | (cc=0.5016) | info on Rv1756c/- |
| Rv2232/ptkA | (cc=0.5015) | info on Rv2232/ptkA |
| Rv2973c/recG | (cc=0.5007) | info on Rv2973c/recG |
Correlation of Rv3417c/groEL1 with Rv1610/-
Normalized LFCs for Rv3417c/groEL1:
(description and provenance of datasets)
| Rv3417c/groEL1 | Rv1610/- | |
| Fe_supp_jason_reseq | 1.528 | 1.897 |
| low_pH_jason_reseq | 0.0 | 0.0 |
| NO_jason_reseq | 0.16 | 0.0 |
| B6_jason_reseq | 0.133 | 0.0 |
| MHCII_jason_reseq | 0.631 | 0.829 |
| Isoniazid02 | 0.585 | -0.496 |
| Rifampicin4 | 0.523 | -0.433 |
| Ethambutol3 | 0.946 | -0.302 |
| Meropenem3 | 0.839 | 3.35 |
| Vancomycin16 | 0.936 | -0.424 |
| Rv2680_day32 | 0.632 | 1.806 |
| H37Rv_KO_MarP | 0.432 | -1.065 |
| hypoxia_3wks | 1.156 | 0.0 |
| hypoxia_6wks | -0.867 | -0.288 |
| glycerol | 1.24 | 0.325 |
| cholesterol | 0.68 | -0.276 |
| AJ | 1.76 | 1.966 |
| Bibs02 | 0.183 | -0.348 |
| Bibs02c | 1.325 | 0.488 |
| BL6 | -0.091 | 0.906 |
| BL6a | 1.291 | -0.181 |
| BXD01 | 0.582 | -0.248 |
| BXD010 | 0.762 | -0.244 |
| BXD011 | 0.383 | -0.116 |
| BXD03 | 0.604 | 0.649 |
| BXD04 | 0.465 | -0.236 |
| BXD05 | -0.314 | -0.256 |
| BXD06 | 0.627 | 0.111 |
| BXD07 | -0.1 | -0.264 |
| BXD08 | 0.292 | -0.253 |
| BXD09 | 0.916 | 0.596 |
| CAST | -0.082 | -0.439 |
| CCcont | 1.662 | 0.0 |
| DS01 | 2.091 | 1.134 |
| DS02 | 2.113 | 1.925 |
| DS04 | 1.228 | -0.37 |
| DS0c | 1.534 | -0.413 |
| GP01 | 0.188 | -0.09 |
| GP02 | 0.479 | -0.159 |
| GP0c | 0.17 | 0.474 |
| NOD | 1.38 | -0.428 |
| NZO | 1.706 | 0.166 |
| PWK | 0.831 | -0.374 |
| H37Rv_KO_CtpC | -1.294 | 0.688 |
| H37Rv_KO_CtpD | 2.216 | 0.0 |
| H37Rv_KO_Rv1272 | 1.29 | 0.329 |
| H37Rv_KO_SugABC | 1.777 | 1.716 |
| H37Rv_KO_MbtN | 0.196 | -0.196 |
| Trans05 | -1.041 | -0.249 |
| macrophage_unactivated | -0.328 | -3.377 |
| IL1 | -3.275 | -3.174 |
| Rapamycin | -1.307 | -2.863 |
| Tcell | -2.74 | -2.255 |
| GMCSF | -1.125 | -1.545 |
| IFNab | 0.828 | -0.922 |
| IFNg | -1.021 | -2.494 |
| IFNg_GMCSF1 | -0.804 | -2.932 |
| Rv1432_day32 | -0.391 | 0.0 |
| Rv1565c_day32 | 1.655 | 0.0 |
| secA2_input | 0.283 | 1.218 |
| delta_Rv3594 | 0.45 | -0.379 |
| delta_Rv3717 | 0.058 | 0.424 |
| delta_Rv3811 | 0.409 | -0.507 |
| delta_Rv0954 | 1.085 | 0.585 |
| PonA1 | -0.027 | -0.509 |
| EccD1_KO | 0.0 | 0.201 |
| EspI_KO | -0.528 | -1.01 |
| PE35_KO | 0.295 | -0.805 |
| PPE68_KO | 0.323 | -0.883 |
| glycerol2 | -0.262 | 0.0 |
| lignocerate | -1.173 | 0.0 |
| oleate | 0.155 | 0.0 |
| phosphatidylcholine | -1.183 | 0.0 |
| acetate | -0.871 | 0.0 |
| glucAc | -1.156 | 0.0 |
| Rv0950ko | -0.145 | -0.706 |
| Rv1096ko | 0.093 | -0.706 |
| Rv3684ko | -0.052 | 0.0 |
| delta_otsA_trehalose | 0.861 | 0.0 |