Top 10 genes with highest correlation to Rv3378c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3429/PPE59 | (cc=0.6567) | info on Rv3429/PPE59 |
| Rv0403c/mmpS1 | (cc=0.6371) | info on Rv0403c/mmpS1 |
| Rv2107/PE22 | (cc=0.6285) | info on Rv2107/PE22 |
| Rv2929/- | (cc=0.6187) | info on Rv2929/- |
| Rv3383c/idsB | (cc=0.5997) | info on Rv3383c/idsB |
| Rv3555c/- | (cc=0.5967) | info on Rv3555c/- |
| Rv3146/nuoB | (cc=0.5797) | info on Rv3146/nuoB |
| Rv0822c/- | (cc=0.57) | info on Rv0822c/- |
| Rv0823c/- | (cc=0.5643) | info on Rv0823c/- |
| Rv1861/- | (cc=0.5616) | info on Rv1861/- |
Correlation of Rv3378c/- with Rv3555c/-
Normalized LFCs for Rv3378c/-:
(description and provenance of datasets)
| Rv3378c/- | Rv3555c/- | |
| Fe_supp_jason_reseq | 0.09 | -1.642 |
| low_pH_jason_reseq | 0.0 | -0.427 |
| NO_jason_reseq | 0.562 | -0.158 |
| B6_jason_reseq | -1.175 | -3.052 |
| MHCII_jason_reseq | -0.922 | -0.977 |
| Isoniazid02 | 0.188 | -0.247 |
| Rifampicin4 | -0.384 | -0.523 |
| Ethambutol3 | 2.745 | -0.153 |
| Meropenem3 | -0.111 | 0.024 |
| Vancomycin16 | -0.122 | 0.0 |
| Rv2680_day32 | 0.219 | -0.916 |
| H37Rv_KO_MarP | 0.346 | 0.103 |
| hypoxia_3wks | 0.55 | -0.267 |
| hypoxia_6wks | 0.288 | -1.361 |
| glycerol | -0.791 | -0.554 |
| cholesterol | -0.435 | 0.864 |
| AJ | 1.356 | -0.297 |
| Bibs02 | -0.123 | -0.408 |
| Bibs02c | -0.141 | -1.881 |
| BL6 | 0.355 | 0.627 |
| BL6a | 1.004 | 0.785 |
| BXD01 | 0.81 | 1.705 |
| BXD010 | 2.138 | 0.278 |
| BXD011 | 0.362 | 0.87 |
| BXD03 | 1.461 | 1.032 |
| BXD04 | 0.855 | 2.404 |
| BXD05 | 0.736 | -0.056 |
| BXD06 | 1.411 | 1.189 |
| BXD07 | 0.702 | 1.662 |
| BXD08 | 1.308 | 1.208 |
| BXD09 | 1.452 | 1.228 |
| CAST | 0.414 | -1.49 |
| CCcont | 0.497 | 0.0 |
| DS01 | 0.149 | -0.197 |
| DS02 | 0.507 | -0.38 |
| DS04 | 1.699 | -0.984 |
| DS0c | 0.506 | -0.596 |
| GP01 | 1.723 | 2.544 |
| GP02 | 1.343 | 2.419 |
| GP0c | 0.76 | 2.452 |
| NOD | 0.0 | -0.392 |
| NZO | 0.465 | -1.011 |
| PWK | 0.995 | 0.61 |
| H37Rv_KO_CtpC | 1.423 | 1.632 |
| H37Rv_KO_CtpD | 1.728 | 1.273 |
| H37Rv_KO_Rv1272 | 1.589 | 0.351 |
| H37Rv_KO_SugABC | 0.462 | 0.865 |
| H37Rv_KO_MbtN | 0.391 | 0.118 |
| Trans05 | 1.529 | 1.333 |
| macrophage_unactivated | 0.17 | -1.13 |
| IL1 | 0.16 | 0.169 |
| Rapamycin | -0.945 | -0.878 |
| Tcell | 0.176 | 0.362 |
| GMCSF | -0.636 | -2.075 |
| IFNab | -0.729 | -1.312 |
| IFNg | -0.644 | -1.601 |
| IFNg_GMCSF1 | -1.191 | -1.882 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | -0.464 | 0.535 |
| secA2_input | -0.174 | -0.186 |
| delta_Rv3594 | -0.85 | -0.626 |
| delta_Rv3717 | -0.7 | -0.693 |
| delta_Rv3811 | 0.0 | -1.054 |
| delta_Rv0954 | 0.074 | -1.452 |
| PonA1 | -0.547 | -2.038 |
| EccD1_KO | -0.171 | -1.536 |
| EspI_KO | 0.55 | -0.279 |
| PE35_KO | -0.475 | -0.995 |
| PPE68_KO | 0.0 | -1.091 |
| glycerol2 | 1.334 | 0.601 |
| lignocerate | -0.751 | -0.505 |
| oleate | 0.044 | 0.425 |
| phosphatidylcholine | 0.209 | 0.482 |
| acetate | -0.522 | -0.883 |
| glucAc | -0.638 | -1.352 |
| Rv0950ko | 1.701 | -0.694 |
| Rv1096ko | 1.007 | 0.781 |
| Rv3684ko | 0.757 | 0.301 |
| delta_otsA_trehalose | 0.435 | 1.858 |