Top 10 genes with highest correlation to Rv3378c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3429/PPE59 | (cc=0.6567) | info on Rv3429/PPE59 |
| Rv0403c/mmpS1 | (cc=0.6371) | info on Rv0403c/mmpS1 |
| Rv2107/PE22 | (cc=0.6285) | info on Rv2107/PE22 |
| Rv2929/- | (cc=0.6187) | info on Rv2929/- |
| Rv3383c/idsB | (cc=0.5997) | info on Rv3383c/idsB |
| Rv3555c/- | (cc=0.5967) | info on Rv3555c/- |
| Rv3146/nuoB | (cc=0.5797) | info on Rv3146/nuoB |
| Rv0822c/- | (cc=0.57) | info on Rv0822c/- |
| Rv0823c/- | (cc=0.5643) | info on Rv0823c/- |
| Rv1861/- | (cc=0.5616) | info on Rv1861/- |
Correlation of Rv3378c/- with Rv3383c/idsB
Normalized LFCs for Rv3378c/-:
(description and provenance of datasets)
| Rv3378c/- | Rv3383c/idsB | |
| Fe_supp_jason_reseq | 0.09 | -0.306 |
| low_pH_jason_reseq | 0.0 | 0.714 |
| NO_jason_reseq | 0.562 | -0.475 |
| B6_jason_reseq | -1.175 | -1.521 |
| MHCII_jason_reseq | -0.922 | -1.537 |
| Isoniazid02 | 0.188 | -0.323 |
| Rifampicin4 | -0.384 | -0.252 |
| Ethambutol3 | 2.745 | 1.086 |
| Meropenem3 | -0.111 | 0.258 |
| Vancomycin16 | -0.122 | -0.034 |
| Rv2680_day32 | 0.219 | -0.478 |
| H37Rv_KO_MarP | 0.346 | 0.57 |
| hypoxia_3wks | 0.55 | 0.518 |
| hypoxia_6wks | 0.288 | -0.28 |
| glycerol | -0.791 | -1.688 |
| cholesterol | -0.435 | -1.032 |
| AJ | 1.356 | -0.383 |
| Bibs02 | -0.123 | 0.334 |
| Bibs02c | -0.141 | -0.05 |
| BL6 | 0.355 | 0.191 |
| BL6a | 1.004 | 1.025 |
| BXD01 | 0.81 | 1.068 |
| BXD010 | 2.138 | 0.389 |
| BXD011 | 0.362 | 1.111 |
| BXD03 | 1.461 | 1.226 |
| BXD04 | 0.855 | 1.54 |
| BXD05 | 0.736 | 1.519 |
| BXD06 | 1.411 | 1.628 |
| BXD07 | 0.702 | 1.066 |
| BXD08 | 1.308 | 0.753 |
| BXD09 | 1.452 | 1.651 |
| CAST | 0.414 | 0.053 |
| CCcont | 0.497 | 0.331 |
| DS01 | 0.149 | -0.113 |
| DS02 | 0.507 | 0.98 |
| DS04 | 1.699 | -0.069 |
| DS0c | 0.506 | 0.734 |
| GP01 | 1.723 | -0.496 |
| GP02 | 1.343 | -0.388 |
| GP0c | 0.76 | 0.288 |
| NOD | 0.0 | 0.498 |
| NZO | 0.465 | -0.72 |
| PWK | 0.995 | -0.219 |
| H37Rv_KO_CtpC | 1.423 | 0.577 |
| H37Rv_KO_CtpD | 1.728 | 1.673 |
| H37Rv_KO_Rv1272 | 1.589 | 2.453 |
| H37Rv_KO_SugABC | 0.462 | 0.893 |
| H37Rv_KO_MbtN | 0.391 | -0.355 |
| Trans05 | 1.529 | 0.486 |
| macrophage_unactivated | 0.17 | -0.407 |
| IL1 | 0.16 | 0.528 |
| Rapamycin | -0.945 | -0.626 |
| Tcell | 0.176 | 0.499 |
| GMCSF | -0.636 | -1.336 |
| IFNab | -0.729 | -1.143 |
| IFNg | -0.644 | 0.051 |
| IFNg_GMCSF1 | -1.191 | -0.06 |
| Rv1432_day32 | 0.0 | 0.119 |
| Rv1565c_day32 | -0.464 | 0.477 |
| secA2_input | -0.174 | -0.307 |
| delta_Rv3594 | -0.85 | -0.852 |
| delta_Rv3717 | -0.7 | -1.016 |
| delta_Rv3811 | 0.0 | -0.94 |
| delta_Rv0954 | 0.074 | -1.339 |
| PonA1 | -0.547 | -0.643 |
| EccD1_KO | -0.171 | -0.155 |
| EspI_KO | 0.55 | -0.245 |
| PE35_KO | -0.475 | 0.461 |
| PPE68_KO | 0.0 | 0.147 |
| glycerol2 | 1.334 | 0.958 |
| lignocerate | -0.751 | 0.276 |
| oleate | 0.044 | 0.448 |
| phosphatidylcholine | 0.209 | 0.917 |
| acetate | -0.522 | -0.145 |
| glucAc | -0.638 | -0.539 |
| Rv0950ko | 1.701 | 0.624 |
| Rv1096ko | 1.007 | 0.648 |
| Rv3684ko | 0.757 | 0.278 |
| delta_otsA_trehalose | 0.435 | 0.554 |