Top 10 genes with highest correlation to Rv3373/echA18:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0691c/- | (cc=0.4411) | info on Rv0691c/- |
| Rv3626c/- | (cc=0.3899) | info on Rv3626c/- |
| Rv0778/cyp126 | (cc=0.3752) | info on Rv0778/cyp126 |
| Rv0146/- | (cc=0.3708) | info on Rv0146/- |
| Rv0300/vapB2 | (cc=0.3696) | info on Rv0300/vapB2 |
| Rv1261c/- | (cc=0.3689) | info on Rv1261c/- |
| Rv3452/cut4 | (cc=0.3634) | info on Rv3452/cut4 |
| Rv0463/- | (cc=0.3626) | info on Rv0463/- |
| Rv1574/- | (cc=0.3608) | info on Rv1574/- |
| Rv3741c/- | (cc=0.3605) | info on Rv3741c/- |
Correlation of Rv3373/echA18 with Rv0300/vapB2
Normalized LFCs for Rv3373/echA18:
(description and provenance of datasets)
| Rv3373/echA18 | Rv0300/vapB2 | |
| Fe_supp_jason_reseq | 1.089 | 0.464 |
| low_pH_jason_reseq | -2.466 | -0.924 |
| NO_jason_reseq | 0.475 | -0.305 |
| B6_jason_reseq | -1.006 | 0.449 |
| MHCII_jason_reseq | -0.077 | 0.094 |
| Isoniazid02 | 0.303 | -0.214 |
| Rifampicin4 | -1.021 | -0.16 |
| Ethambutol3 | -0.269 | 0.029 |
| Meropenem3 | 2.485 | 0.422 |
| Vancomycin16 | 0.202 | -0.098 |
| Rv2680_day32 | 0.499 | -0.998 |
| H37Rv_KO_MarP | -1.851 | -0.378 |
| hypoxia_3wks | 0.475 | -0.682 |
| hypoxia_6wks | -0.954 | -0.551 |
| glycerol | -0.211 | 0.553 |
| cholesterol | 1.444 | 0.867 |
| AJ | 1.914 | 0.44 |
| Bibs02 | 1.057 | 0.327 |
| Bibs02c | 0.077 | 0.026 |
| BL6 | 0.104 | -1.319 |
| BL6a | 0.722 | 0.504 |
| BXD01 | 1.038 | -0.518 |
| BXD010 | -1.92 | -0.679 |
| BXD011 | -0.281 | -0.288 |
| BXD03 | 0.232 | -0.188 |
| BXD04 | 0.406 | -0.183 |
| BXD05 | 0.216 | 0.488 |
| BXD06 | -0.139 | -0.314 |
| BXD07 | 0.517 | 0.379 |
| BXD08 | 0.228 | -0.321 |
| BXD09 | 0.133 | -0.228 |
| CAST | 0.561 | 0.904 |
| CCcont | 0.037 | -0.731 |
| DS01 | 0.575 | 0.053 |
| DS02 | -0.69 | 0.884 |
| DS04 | -0.489 | -1.216 |
| DS0c | -0.878 | 0.107 |
| GP01 | -1.711 | -0.693 |
| GP02 | -1.623 | -1.436 |
| GP0c | -0.818 | -0.722 |
| NOD | -1.572 | 0.477 |
| NZO | 0.445 | 0.168 |
| PWK | -0.831 | 0.219 |
| H37Rv_KO_CtpC | -0.384 | 0.0 |
| H37Rv_KO_CtpD | 2.245 | 0.2 |
| H37Rv_KO_Rv1272 | -1.619 | -0.461 |
| H37Rv_KO_SugABC | -0.877 | 0.119 |
| H37Rv_KO_MbtN | 1.805 | -0.46 |
| Trans05 | -1.195 | -0.193 |
| macrophage_unactivated | -0.218 | -0.609 |
| IL1 | -0.05 | 0.451 |
| Rapamycin | 0.534 | 0.479 |
| Tcell | 0.518 | 0.424 |
| GMCSF | 0.536 | 0.227 |
| IFNab | -0.369 | 0.599 |
| IFNg | 1.088 | 0.51 |
| IFNg_GMCSF1 | -0.053 | 0.386 |
| Rv1432_day32 | -2.327 | -0.645 |
| Rv1565c_day32 | -1.802 | 1.42 |
| secA2_input | -2.264 | -0.908 |
| delta_Rv3594 | -1.092 | -0.434 |
| delta_Rv3717 | -3.62 | -0.888 |
| delta_Rv3811 | -0.922 | 0.813 |
| delta_Rv0954 | -0.751 | 0.703 |
| PonA1 | 0.048 | 0.935 |
| EccD1_KO | 0.178 | 0.559 |
| EspI_KO | 0.65 | -0.194 |
| PE35_KO | 0.866 | 0.032 |
| PPE68_KO | -0.71 | -0.278 |
| glycerol2 | 0.129 | -0.189 |
| lignocerate | -0.304 | -0.231 |
| oleate | 0.658 | -0.204 |
| phosphatidylcholine | 0.231 | -0.59 |
| acetate | 0.54 | -1.014 |
| glucAc | -0.923 | -0.841 |
| Rv0950ko | 0.887 | 0.778 |
| Rv1096ko | 1.457 | 0.483 |
| Rv3684ko | 0.92 | -0.183 |
| delta_otsA_trehalose | -2.912 | -1.349 |