Top 10 genes with highest correlation to Rv3330/dacB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2190c/- | (cc=0.5632) | info on Rv2190c/- |
| Rv2696c/- | (cc=0.5628) | info on Rv2696c/- |
| Rv1006/- | (cc=0.5406) | info on Rv1006/- |
| Rv1159/pimE | (cc=0.5217) | info on Rv1159/pimE |
| Rv0431/- | (cc=0.5135) | info on Rv0431/- |
| Rv3790/dprE1 | (cc=0.5052) | info on Rv3790/dprE1 |
| Rv2525c/- | (cc=0.5012) | info on Rv2525c/- |
| Rv1111c/- | (cc=0.4934) | info on Rv1111c/- |
| Rv0497/- | (cc=0.4811) | info on Rv0497/- |
| Rv1701/- | (cc=0.4745) | info on Rv1701/- |
Correlation of Rv3330/dacB1 with Rv1701/-
Normalized LFCs for Rv3330/dacB1:
(description and provenance of datasets)
| Rv3330/dacB1 | Rv1701/- | |
| Fe_supp_jason_reseq | -0.104 | 0.538 |
| low_pH_jason_reseq | -0.55 | -0.345 |
| NO_jason_reseq | -0.381 | 0.0 |
| B6_jason_reseq | -0.431 | -0.649 |
| MHCII_jason_reseq | 0.622 | -0.315 |
| Isoniazid02 | -0.125 | 0.63 |
| Rifampicin4 | -2.364 | -1.995 |
| Ethambutol3 | 0.266 | -1.048 |
| Meropenem3 | -1.579 | -0.744 |
| Vancomycin16 | -0.515 | -0.512 |
| Rv2680_day32 | -0.82 | -0.459 |
| H37Rv_KO_MarP | -1.795 | -1.205 |
| hypoxia_3wks | 0.271 | -0.722 |
| hypoxia_6wks | -0.509 | -0.808 |
| glycerol | 0.173 | 2.741 |
| cholesterol | 0.537 | 2.486 |
| AJ | -0.343 | -0.442 |
| Bibs02 | 0.866 | -0.167 |
| Bibs02c | 0.211 | -0.399 |
| BL6 | 0.492 | -0.114 |
| BL6a | 0.032 | -0.181 |
| BXD01 | 0.0 | -0.248 |
| BXD010 | -0.201 | -0.244 |
| BXD011 | 0.336 | 0.0 |
| BXD03 | 0.296 | 0.113 |
| BXD04 | 0.262 | -0.236 |
| BXD05 | 0.631 | 0.0 |
| BXD06 | 0.032 | -0.254 |
| BXD07 | 0.482 | 0.0 |
| BXD08 | 0.291 | -0.253 |
| BXD09 | 0.0 | -0.268 |
| CAST | -0.637 | -0.439 |
| CCcont | 0.605 | 2.164 |
| DS01 | 0.149 | -0.45 |
| DS02 | -0.49 | 0.0 |
| DS04 | 0.136 | 0.0 |
| DS0c | 0.327 | -0.413 |
| GP01 | 0.723 | -0.188 |
| GP02 | 0.751 | -0.159 |
| GP0c | 0.649 | 0.303 |
| NOD | -0.439 | -0.205 |
| NZO | -0.116 | -0.38 |
| PWK | 0.566 | -0.374 |
| H37Rv_KO_CtpC | 0.245 | -0.148 |
| H37Rv_KO_CtpD | -0.649 | 0.295 |
| H37Rv_KO_Rv1272 | 0.515 | -0.129 |
| H37Rv_KO_SugABC | 0.664 | 0.0 |
| H37Rv_KO_MbtN | 0.92 | 0.0 |
| Trans05 | 0.268 | -0.119 |
| macrophage_unactivated | 0.505 | 0.0 |
| IL1 | 0.199 | -0.374 |
| Rapamycin | 0.635 | -0.387 |
| Tcell | 0.339 | 0.0 |
| GMCSF | 0.784 | 0.0 |
| IFNab | 0.227 | 0.0 |
| IFNg | 0.778 | 0.307 |
| IFNg_GMCSF1 | 0.952 | -0.396 |
| Rv1432_day32 | 0.714 | 0.0 |
| Rv1565c_day32 | -0.167 | -1.339 |
| secA2_input | -0.291 | -0.423 |
| delta_Rv3594 | -0.132 | 0.281 |
| delta_Rv3717 | -0.159 | -0.415 |
| delta_Rv3811 | -0.342 | -0.553 |
| delta_Rv0954 | -0.012 | 0.163 |
| PonA1 | 0.572 | -0.753 |
| EccD1_KO | -0.585 | -2.529 |
| EspI_KO | -1.469 | -1.76 |
| PE35_KO | -1.581 | -0.805 |
| PPE68_KO | -1.065 | -1.133 |
| glycerol2 | -0.111 | -1.712 |
| lignocerate | 0.106 | -1.348 |
| oleate | -0.293 | -1.911 |
| phosphatidylcholine | -0.398 | -1.711 |
| acetate | 0.263 | -0.178 |
| glucAc | 0.211 | 0.375 |
| Rv0950ko | -0.805 | -0.814 |
| Rv1096ko | -0.09 | -0.446 |
| Rv3684ko | -0.648 | -1.32 |
| delta_otsA_trehalose | 0.825 | -0.311 |