Top 10 genes with highest correlation to Rv3328c/sigJ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1351/- | (cc=0.6387) | info on Rv1351/- |
| Rv2636/- | (cc=0.6109) | info on Rv2636/- |
| Rv2681/- | (cc=0.5947) | info on Rv2681/- |
| Rv3607c/folB | (cc=0.5921) | info on Rv3607c/folB |
| Rv0985c/mscL | (cc=0.5879) | info on Rv0985c/mscL |
| Rv0080/- | (cc=0.5856) | info on Rv0080/- |
| Rv0984/moaB2 | (cc=0.5852) | info on Rv0984/moaB2 |
| Rv0359/- | (cc=0.5687) | info on Rv0359/- |
| Rv1041c/- | (cc=0.562) | info on Rv1041c/- |
| Rv0356c/- | (cc=0.5619) | info on Rv0356c/- |
Correlation of Rv3328c/sigJ with Rv2636/-
Normalized LFCs for Rv3328c/sigJ:
(description and provenance of datasets)
| Rv3328c/sigJ | Rv2636/- | |
| Fe_supp_jason_reseq | 1.721 | -0.073 |
| low_pH_jason_reseq | -2.098 | -0.942 |
| NO_jason_reseq | -0.189 | 0.071 |
| B6_jason_reseq | 1.393 | 1.243 |
| MHCII_jason_reseq | 1.706 | 1.783 |
| Isoniazid02 | -0.495 | -0.55 |
| Rifampicin4 | 0.079 | 0.162 |
| Ethambutol3 | -0.528 | 0.417 |
| Meropenem3 | -0.343 | -1.06 |
| Vancomycin16 | -0.077 | -0.642 |
| Rv2680_day32 | -0.136 | 1.092 |
| H37Rv_KO_MarP | -0.106 | 0.013 |
| hypoxia_3wks | -0.614 | 0.056 |
| hypoxia_6wks | -1.662 | -0.186 |
| glycerol | 0.468 | 0.263 |
| cholesterol | 0.0 | 0.048 |
| AJ | -0.049 | 0.345 |
| Bibs02 | 0.0 | 0.177 |
| Bibs02c | 0.644 | 0.358 |
| BL6 | -0.12 | -0.987 |
| BL6a | -0.056 | -0.442 |
| BXD01 | -0.796 | -1.222 |
| BXD010 | -1.174 | -0.989 |
| BXD011 | -1.025 | -1.507 |
| BXD03 | -1.109 | -1.037 |
| BXD04 | -0.905 | -1.588 |
| BXD05 | -1.535 | -0.968 |
| BXD06 | -1.61 | -1.495 |
| BXD07 | -1.365 | -1.077 |
| BXD08 | -0.991 | -0.781 |
| BXD09 | -1.896 | -1.87 |
| CAST | 0.442 | 0.174 |
| CCcont | -1.319 | -1.767 |
| DS01 | 0.652 | 0.399 |
| DS02 | 0.646 | 0.578 |
| DS04 | 0.715 | -0.409 |
| DS0c | 1.032 | 0.083 |
| GP01 | -0.028 | -0.456 |
| GP02 | -0.119 | -0.744 |
| GP0c | -1.027 | -0.677 |
| NOD | 0.296 | 0.574 |
| NZO | -0.75 | 0.126 |
| PWK | 0.742 | -0.057 |
| H37Rv_KO_CtpC | -0.411 | -1.77 |
| H37Rv_KO_CtpD | 0.557 | -0.581 |
| H37Rv_KO_Rv1272 | -0.179 | -1.089 |
| H37Rv_KO_SugABC | -2.188 | -1.719 |
| H37Rv_KO_MbtN | -1.155 | -0.848 |
| Trans05 | -0.125 | -0.088 |
| macrophage_unactivated | -0.672 | -0.653 |
| IL1 | -2.186 | -0.445 |
| Rapamycin | -1.501 | -0.546 |
| Tcell | -0.978 | -0.867 |
| GMCSF | -0.911 | -0.446 |
| IFNab | -1.403 | -1.155 |
| IFNg | -2.576 | -0.136 |
| IFNg_GMCSF1 | -1.304 | -0.079 |
| Rv1432_day32 | 0.222 | -0.16 |
| Rv1565c_day32 | 0.205 | 0.062 |
| secA2_input | 1.19 | 1.133 |
| delta_Rv3594 | -0.298 | -0.601 |
| delta_Rv3717 | -0.944 | -0.271 |
| delta_Rv3811 | -0.335 | -0.458 |
| delta_Rv0954 | -0.068 | 0.151 |
| PonA1 | -0.387 | -0.324 |
| EccD1_KO | 0.97 | -0.151 |
| EspI_KO | -0.046 | 0.271 |
| PE35_KO | -0.245 | -0.079 |
| PPE68_KO | -0.106 | -0.266 |
| glycerol2 | -0.247 | 0.534 |
| lignocerate | -0.458 | 0.498 |
| oleate | -0.065 | 0.303 |
| phosphatidylcholine | -0.27 | 0.709 |
| acetate | -0.899 | 0.156 |
| glucAc | -0.13 | 0.155 |
| Rv0950ko | -1.167 | -0.027 |
| Rv1096ko | -0.691 | -0.25 |
| Rv3684ko | -0.698 | -0.662 |
| delta_otsA_trehalose | -0.214 | 0.719 |