Top 10 genes with highest correlation to Rv3328c/sigJ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1351/- | (cc=0.6387) | info on Rv1351/- |
| Rv2636/- | (cc=0.6109) | info on Rv2636/- |
| Rv2681/- | (cc=0.5947) | info on Rv2681/- |
| Rv3607c/folB | (cc=0.5921) | info on Rv3607c/folB |
| Rv0985c/mscL | (cc=0.5879) | info on Rv0985c/mscL |
| Rv0080/- | (cc=0.5856) | info on Rv0080/- |
| Rv0984/moaB2 | (cc=0.5852) | info on Rv0984/moaB2 |
| Rv0359/- | (cc=0.5687) | info on Rv0359/- |
| Rv1041c/- | (cc=0.562) | info on Rv1041c/- |
| Rv0356c/- | (cc=0.5619) | info on Rv0356c/- |
Correlation of Rv3328c/sigJ with Rv1041c/-
Normalized LFCs for Rv3328c/sigJ:
(description and provenance of datasets)
| Rv3328c/sigJ | Rv1041c/- | |
| Fe_supp_jason_reseq | 1.721 | -0.717 |
| low_pH_jason_reseq | -2.098 | -0.604 |
| NO_jason_reseq | -0.189 | 0.034 |
| B6_jason_reseq | 1.393 | 0.426 |
| MHCII_jason_reseq | 1.706 | 0.427 |
| Isoniazid02 | -0.495 | -0.191 |
| Rifampicin4 | 0.079 | 0.555 |
| Ethambutol3 | -0.528 | -0.009 |
| Meropenem3 | -0.343 | 0.246 |
| Vancomycin16 | -0.077 | 0.077 |
| Rv2680_day32 | -0.136 | 0.092 |
| H37Rv_KO_MarP | -0.106 | 0.443 |
| hypoxia_3wks | -0.614 | 0.463 |
| hypoxia_6wks | -1.662 | 0.388 |
| glycerol | 0.468 | 0.301 |
| cholesterol | 0.0 | 0.111 |
| AJ | -0.049 | 0.467 |
| Bibs02 | 0.0 | -0.025 |
| Bibs02c | 0.644 | 0.878 |
| BL6 | -0.12 | -0.511 |
| BL6a | -0.056 | 0.209 |
| BXD01 | -0.796 | -0.127 |
| BXD010 | -1.174 | -0.277 |
| BXD011 | -1.025 | -0.311 |
| BXD03 | -1.109 | -0.22 |
| BXD04 | -0.905 | -0.262 |
| BXD05 | -1.535 | -0.019 |
| BXD06 | -1.61 | -0.157 |
| BXD07 | -1.365 | -0.602 |
| BXD08 | -0.991 | -0.325 |
| BXD09 | -1.896 | -0.392 |
| CAST | 0.442 | 0.317 |
| CCcont | -1.319 | -0.997 |
| DS01 | 0.652 | 0.424 |
| DS02 | 0.646 | 0.282 |
| DS04 | 0.715 | 0.419 |
| DS0c | 1.032 | 0.229 |
| GP01 | -0.028 | -0.156 |
| GP02 | -0.119 | -0.086 |
| GP0c | -1.027 | -1.031 |
| NOD | 0.296 | 0.901 |
| NZO | -0.75 | -0.337 |
| PWK | 0.742 | 0.601 |
| H37Rv_KO_CtpC | -0.411 | 1.289 |
| H37Rv_KO_CtpD | 0.557 | 0.169 |
| H37Rv_KO_Rv1272 | -0.179 | -0.104 |
| H37Rv_KO_SugABC | -2.188 | -0.259 |
| H37Rv_KO_MbtN | -1.155 | 0.018 |
| Trans05 | -0.125 | -0.006 |
| macrophage_unactivated | -0.672 | -1.048 |
| IL1 | -2.186 | -0.833 |
| Rapamycin | -1.501 | -1.117 |
| Tcell | -0.978 | -0.916 |
| GMCSF | -0.911 | -0.462 |
| IFNab | -1.403 | -0.973 |
| IFNg | -2.576 | -1.328 |
| IFNg_GMCSF1 | -1.304 | -0.267 |
| Rv1432_day32 | 0.222 | 0.232 |
| Rv1565c_day32 | 0.205 | 0.319 |
| secA2_input | 1.19 | 0.402 |
| delta_Rv3594 | -0.298 | -0.48 |
| delta_Rv3717 | -0.944 | -0.269 |
| delta_Rv3811 | -0.335 | -0.613 |
| delta_Rv0954 | -0.068 | -0.112 |
| PonA1 | -0.387 | -0.196 |
| EccD1_KO | 0.97 | 0.618 |
| EspI_KO | -0.046 | 0.559 |
| PE35_KO | -0.245 | 0.648 |
| PPE68_KO | -0.106 | 0.429 |
| glycerol2 | -0.247 | -0.13 |
| lignocerate | -0.458 | -0.354 |
| oleate | -0.065 | 0.25 |
| phosphatidylcholine | -0.27 | 0.01 |
| acetate | -0.899 | -0.218 |
| glucAc | -0.13 | -0.478 |
| Rv0950ko | -1.167 | 0.353 |
| Rv1096ko | -0.691 | 0.48 |
| Rv3684ko | -0.698 | -0.062 |
| delta_otsA_trehalose | -0.214 | 0.558 |